Gene Expression Data
Assay Details
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Assay
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Reference:
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J:240035
Roux M, et al., Hoxa1 and Hoxb1 are required for pharyngeal arch artery development. Mech Dev. 2017 Feb;143:1-8
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:6257901
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Gene symbol:
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Zic1
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Gene name:
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zinc finger protein of the cerebellum 1
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Probe:
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Zic1 probe4
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
7A:
embryonic day 8.5; Hoxb1tm5Mrc/Hoxb1 +
(more  )
Specimen
7A:
(close  )
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Genetic Background:
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involves: 129S1/Sv * 129X1/SvJ * C57BL/6
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Mutant Allele(s):
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Hoxb1tm5Mrc/Hoxb1+
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: neural ectoderm |
Present |
Regionally restricted |
7A
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Expression at neural plate border.
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Specimen
7B:
(close )
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Genetic Background:
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involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * C57BL/6
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Mutant Allele(s):
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Hoxa1tm1Ipc/Hoxa1+
Hoxb1tm5Mrc/Hoxb1+
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: neural ectoderm |
Present |
Regionally restricted |
7B
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Expression at neural plate border.
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Specimen
7C:
(close )
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Genetic Background:
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involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * C57BL/6
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Mutant Allele(s):
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Hoxa1tm1Ipc/Hoxa1+
Hoxb1tm5Mrc/Hoxb1tm5Mrc
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: future hindbrain |
Trace |
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7C
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Expression strongly downregulated in posterior hindbrain compared to single mutants.
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Specimen
7D:
(close )
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Genetic Background:
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involves: 129S1/Sv * 129X1/SvJ * C57BL/6
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Mutant Allele(s):
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Hoxb1tm5Mrc/Hoxb1tm5Mrc
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: neural ectoderm |
Present |
Regionally restricted |
7D
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Expression at neural plate border.
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Specimen
7E:
(close )
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Genetic Background:
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involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * C57BL/6
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Mutant Allele(s):
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Hoxa1tm1Ipc/Hoxa1tm1Ipc
Hoxb1tm5Mrc/Hoxb1+
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: future hindbrain |
Trace |
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7E
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Expression strongly downregulated in posterior hindbrain compared to single mutants.
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Specimen
7F:
(close )
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Genetic Background:
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involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * C57BL/6
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Mutant Allele(s):
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Hoxa1tm1Ipc/Hoxa1tm1Ipc
Hoxb1tm5Mrc/Hoxb1tm5Mrc
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: future hindbrain |
Trace |
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7F
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Expression strongly downregulated in posterior hindbrain compared to single mutants.
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Analysis Tools