Gene Expression Data
Assay Details
Assay
|
Reference:
|
J:84657
Vigers AJ, et al., Neurotrophin-3 is expressed in a discrete subset of olfactory receptor neurons in the mouse. J Comp Neurol. 2003 Aug 18;463(2):221-35
|
Assay type:
|
In situ reporter (knock in)
|
MGI Accession ID:
|
MGI:6202695
|
Gene symbol:
|
Ntf3
|
Gene name:
|
neurotrophin 3
|
Reporter:
|
lacZ
|
|
Direct Detection
|
|
Results
|
Specimen
1A:
embryonic day 10.5; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
1A:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
1B:
embryonic day 11.5; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
1B:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: olfactory epithelium |
Present |
|
1B
|
More reactivity in apical and basal regions. There was differential staining intensity in different parts of the epithelium, but rather than a general gradient of staining.
|
Specimen
1C:
embryonic day 12.5; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
1C:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
1D:
embryonic day 14.5; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
1D:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
1E:
embryonic day 15.5; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
1E:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
embryonic day 15.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: olfactory epithelium |
Strong |
Regionally restricted |
1E
|
Expressed in several regions, particularly the apical layer, although reactive cells were present throughout the height of the epithelium.
|
TS23: nasal mesenchyme |
Present |
Diffuse |
1E
|
Paler staining beneath the epithelium itself, possibly in the axons of the olfactory receptor cells as well as in underlying mesenchyme.
|
Specimen
1F:
embryonic day 16.5; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
1F:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
embryonic day 16.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS24: olfactory epithelium |
Strong |
Regionally restricted |
1F
|
Expressed in several regions, particularly the apical layer, although reactive cells were present throughout the height of the epithelium.
|
TS24: nasal mesenchyme |
Present |
Diffuse |
1F
|
Paler staining beneath the epithelium itself, possibly in the axons of the olfactory receptor cells as well as in underlying mesenchyme.
|
Specimen
1G:
embryonic day 17.5; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
1G:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
embryonic day 17.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS25: olfactory epithelium |
Strong |
Regionally restricted |
1G
|
Expressed in several regions, particularly the apical layer, although reactive cells were present throughout the height of the epithelium.
|
TS25: nasal mesenchyme |
Present |
Diffuse |
1G
|
Paler staining beneath the epithelium itself, possibly in the axons of the olfactory receptor cells as well as in underlying mesenchyme.
|
Specimen
1H:
embryonic day 17.5; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
1H:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
embryonic day 17.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS25: olfactory epithelium |
Strong |
Regionally restricted |
1H
|
Expressed in several regions, particularly the apical layer, although reactive cells were present throughout the height of the epithelium.
|
TS25: nasal mesenchyme |
Present |
Diffuse |
1H
|
Paler staining beneath the epithelium itself, possibly in the axons of the olfactory receptor cells as well as in underlying mesenchyme.
|
TS25: olfactory nerve |
Present |
|
1H
|
Heavier staining in olfactory receptor neurons axons as they enter the olfactory bulb. Reactive fascicles of olfactory nerve fibers bridge between the olfactory epithelium and olfactory bulb.
|
Specimen
2A:
embryonic day 16.5; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
2A:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
embryonic day 16.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
2B:
embryonic day 17.5; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
2B:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
embryonic day 17.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
2C:
embryonic day 19.5; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
2C:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
embryonic day 19.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
2D:
postnatal day 0; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
2D:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal day 0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
2E:
postnatal day 8; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
2E:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal day 8
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
2F:
postnatal day 8; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
2F:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal day 8
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
2G:
postnatal week 8; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
2G:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal week 8
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: main olfactory bulb layer |
Strong |
|
2G
|
Differentially reactive glomeruli, with some glomeruli heavily stained and others showing no stain at all.
|
Specimen
2H:
postnatal week 8; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
2H:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal week 8
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: main olfactory bulb layer |
Strong |
|
2H
|
Differentially reactive glomeruli, with some glomeruli heavily stained and others showing no stain at all.
|
Specimen
3A:
postnatal week 8; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
3A:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal week 8
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: olfactory epithelium |
Strong |
|
3A
|
Most intense stain was in the posterior portions of endoturbinates IIa and IIb. A strong patch staining in the central region of turbinate IIb.
|
Specimen
3B:
postnatal week 8; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
3B:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal week 8
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: olfactory epithelium |
Strong |
|
3B
|
Most intense stain was in the posterior portions of endoturbinates IIa and IIb. A strong patch staining in the central region of turbinate IIb.
|
Specimen
5A:
postnatal week 8; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
5A:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal week 8
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: main olfactory bulb |
Strong |
Regionally restricted |
5A
|
Expressed as a band of glomeruli run from the midlateral anterior part of the ventral olfactory bulb to a more medial posterior location. Within this band of stained glomeruli lay a ventral group of large, heavily stained glomeruli (8 to 20 on each side).
|
Specimen
5B:
postnatal week 8; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
5B:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal week 8
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: main olfactory bulb |
Strong |
Regionally restricted |
5B
|
Expressed as a band of glomeruli run from the midlateral anterior part of the ventral olfactory bulb to a more medial posterior location. Within this band of stained glomeruli lay a ventral group of large, heavily stained glomeruli (8 to 20 on each side).
|
Specimen
5C:
postnatal week 8; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
5C:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal week 8
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: main olfactory bulb |
Strong |
Regionally restricted |
5C
|
Expressed as a band of glomeruli run from the midlateral anterior part of the ventral olfactory bulb to a more medial posterior location. Within this band of stained glomeruli lay a ventral group of large, heavily stained glomeruli (8 to 20 on each side).
|
Specimen
5D:
postnatal week 8; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
5D:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal week 8
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: main olfactory bulb |
Strong |
Regionally restricted |
5D
|
Expressed as a band of glomeruli run from the midlateral anterior part of the ventral olfactory bulb to a more medial posterior location. Within this band of stained glomeruli lay a ventral group of large, heavily stained glomeruli (8 to 20 on each side).
|
Specimen
5E:
postnatal week 8; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
5E:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal week 8
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: main olfactory bulb |
Strong |
Regionally restricted |
5E
|
Expressed as a band of glomeruli run from the midlateral anterior part of the ventral olfactory bulb to a more medial posterior location. Within this band of stained glomeruli lay a ventral group of large, heavily stained glomeruli (8 to 20 on each side).
|
Specimen
5G:
postnatal week 8; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
5G:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal week 8
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: main olfactory bulb |
Strong |
Regionally restricted |
5G
|
Expressed as a band of glomeruli run from the midlateral anterior part of the ventral olfactory bulb to a more medial posterior location. Within this band of stained glomeruli lay a ventral group of large, heavily stained glomeruli (8 to 20 on each side).
|
Specimen
5H:
postnatal week 8; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
5H:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal week 8
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: main olfactory bulb |
Strong |
Regionally restricted |
5H
|
Expressed as a band of glomeruli run from the midlateral anterior part of the ventral olfactory bulb to a more medial posterior location. Within this band of stained glomeruli lay a ventral group of large, heavily stained glomeruli (8 to 20 on each side).
|
Specimen
5I:
postnatal week 8; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
5I:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal week 8
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: main olfactory bulb |
Strong |
Regionally restricted |
5I
|
Expressed as a band of glomeruli run from the midlateral anterior part of the ventral olfactory bulb to a more medial posterior location. Within this band of stained glomeruli lay a ventral group of large, heavily stained glomeruli (8 to 20 on each side).
|
Specimen
5J:
postnatal week 8; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
5J:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal week 8
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: main olfactory bulb |
Strong |
Regionally restricted |
5J
|
Expressed as a band of glomeruli run from the midlateral anterior part of the ventral olfactory bulb to a more medial posterior location. Within this band of stained glomeruli lay a ventral group of large, heavily stained glomeruli (8 to 20 on each side).
|
Specimen
8:
postnatal week 8; Ntf3tm1Lfr/Ntf3 +
(more )
Note: Double labeled: blue - Ntf3; brown - Omp (assay MGI:6202724).
Specimen
8:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal week 8
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
Double labeled: blue - Ntf3; brown - Omp (assay MGI:6202724).
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: main olfactory bulb |
Present |
Regionally restricted |
8
|
Positive staining didn't colocalize with trigeminally innervated glomeruli. High expression in glomeruli 1 and 2 but little Calca-like immunoreactivity was present, whereas Calca-immunoreactive fibers entered glomeruli 3 and 4.
|
Specimen
not shown:
embryonic day 14.5; Ntf3tm1Lfr/Ntf3 +
(more )
Specimen
not shown:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
not shown:
postnatal week 8; Ntf3tm1Lfr/Ntf3 +
(more )
Note: Also stained for Prph (assay MGI:6202964).
Specimen
not shown:
(close )
Genetic Background:
|
B6.129S2-Ntf3tm1Lfr
|
Mutant Allele(s):
|
Ntf3tm1Lfr/Ntf3+
|
Age:
|
postnatal week 8
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
Also stained for Prph (assay MGI:6202964).
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: main olfactory bulb |
Present |
Regionally restricted |
|
Positive staining didn't colocalize with trigeminally innervated glomeruli.
|
|