Gene Expression Data
Assay Details
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Assay
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Reference:
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J:242163
Aavani T, et al., Temporal profiling of photoreceptor lineage gene expression during murine retinal development. Gene Expr Patterns. 2017 Jan;23-24:32-44
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:6195170
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Gene symbol:
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Opn1sw
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Gene name:
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opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
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Probe:
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MGC clone 28865
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
not shown:
embryonic day 12.5
(more  )
Specimen
not shown:
(close  )
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Genetic Background:
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CD-1
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Specimen
S2D:
embryonic day 15.5
(more )
Specimen
S2D:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 15.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Specimen
5F:
postnatal day 0
(more )
Specimen
5F:
(close )
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Genetic Background:
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CD-1
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Age:
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postnatal day 0
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS27: retina outer nuclear layer |
Present |
Regionally restricted |
5F''
,
5F
,
5F'
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Expression was detected in the upper presumptive outer nuclear layer. Opn1sw was more highly expressed in the ventral domains of the retina with lower expression in the dorsal retina.
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Specimen
5G:
postnatal day 7
(more )
Specimen
5G:
(close )
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Genetic Background:
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CD-1
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Age:
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postnatal day 7
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS28: retina outer nuclear layer |
Present |
Regionally restricted |
5G'
,
5G
,
5G''
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Expression was detected in the upper outer nuclear layer. Opn1sw was more highly expressed in the ventral domains of the retina with lower expression in the dorsal retina.
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Specimen
5H:
postnatal day 14
(more )
Specimen
5H:
(close )
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Genetic Background:
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CD-1
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Age:
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postnatal day 14
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS28: retina outer nuclear layer |
Present |
Regionally restricted |
5H''
,
5H
,
5H'
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Expression was detected in the upper outer nuclear layer. Opn1sw was more highly expressed in the ventral domains of the retina with lower expression in the dorsal retina.
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Specimen
5I:
postnatal day 21
(more )
Specimen
5I:
(close )
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Genetic Background:
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CD-1
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Age:
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postnatal day 21
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS28: retina outer nuclear layer |
Present |
Regionally restricted |
5I'
,
5I
,
5I''
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Expression was detected in the upper outer nuclear layer. Opn1sw was more highly expressed in the ventral domains of the retina with lower expression in the dorsal retina.
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Specimen
5J:
postnatal day 60
(more )
Specimen
5J:
(close )
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Genetic Background:
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CD-1
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Age:
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postnatal day 60
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS28: retina outer nuclear layer |
Present |
Regionally restricted |
5J''
,
5J'
,
5J
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Expression was detected in the upper outer nuclear layer. Opn1sw was more highly expressed in the ventral domains of the retina with lower expression in the dorsal retina.
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