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Gene Expression Data
Assay Details
Assay
Reference: J:217851 Oetjen S, et al., Spatiotemporal expression analysis of the growth factor receptor SorCS3. J Comp Neurol. 2014 Oct 15;522(15):3386-402
Assay type: RNA in situ
MGI Accession ID: MGI:6189595
Gene symbol: Sorcs3
Gene name: sortilin-related VPS10 domain containing receptor 3
Probe: Sorcs3 cDNA2
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 2A: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: spinal cord Strong 2A
TS20: cerebral cortex Absent 2A

Specimen 2B: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: main olfactory bulb Strong 2B
TS22: midbrain Strong 2B
TS22: spinal cord Strong 2B
TS22: thalamus Strong 2B
TS22: cerebral cortex Absent 2B

Specimen 2C: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: main olfactory bulb Strong 2C
TS24: midbrain Strong 2C
TS24: spinal cord Strong 2C
TS24: thalamus Strong 2C
TS24: cerebral cortex Absent 2C

Specimen 2D: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: main olfactory bulb Strong 2D
TS26: midbrain Strong 2D
TS26: spinal cord Strong 2D
TS26: thalamus Strong 2D
TS26: cerebral cortex Absent 2D

Specimen 3A: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: brain Strong Regionally restricted 3A Expression is in the posterior neuroepithelium.

Specimen 3D: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: brain nucleus Present Regionally restricted 3D Expression is in the red nucleus.
TS22: brain ventricular layer Absent 3D
TS22: hippocampus Absent 3D

Specimen 3E: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: inferior colliculus Present 3E
TS22: brain ventricular layer Absent 3E
TS22: hippocampus Absent 3E

Specimen 4A: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: dorsal lateral geniculate nucleus Present 4A
TS22: superior colliculus Present 4A
TS22: thalamus Present 4A
TS22: ventral posterior lateral thalamic nucleus Present 4A
TS22: ventral posterior medial thalamic nucleus Present 4A
TS22: cerebral cortex Absent 4A

Specimen 4B: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: superior colliculus Strong Regionally restricted 4B Expression is in the deeper layer.
TS24: dorsal lateral geniculate nucleus Present 4B
TS24: thalamus Present 4B
TS24: ventral posterior lateral thalamic nucleus Present 4B
TS24: ventral posterior medial thalamic nucleus Present 4B
TS24: cerebral cortex Absent 4B

Specimen 4C: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: dorsal lateral geniculate nucleus Present 4C
TS26: superior colliculus Present 4C
TS26: thalamus Present 4C
TS26: ventral posterior lateral thalamic nucleus Present 4C
TS26: ventral posterior medial thalamic nucleus Present 4C
TS26: cerebral cortex Absent 4C

Specimen 4D: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: dorsal lateral geniculate nucleus Present 4D
TS26: globus pallidus Present 4D
TS26: superior colliculus Present 4D
TS26: trigeminal ganglion Present 4D
TS26: ventral posterior lateral thalamic nucleus Present 4D
TS26: ventral posterior medial thalamic nucleus Present 4D
TS26: cerebral cortex Absent 4D

Specimen 5A: postnatal day 3 (more )
Structure Level Pattern Image Note
TS27: cortical layer II Present 5A
TS27: cortical layer VI Present 5A
TS27: hippocampus CA1 Present 5A

Specimen 5D: postnatal day 3 (more )
Structure Level Pattern Image Note
TS27: cortical layer II Present 5D
TS27: cortical layer VI Present 5D
TS27: dorsal lateral geniculate nucleus Present 5D
TS27: habenula Present 5D
TS27: hippocampus CA1 Present 5D
TS27: inferior colliculus Present 5D
TS27: medial geniculate nucleus Present 5D
TS27: parafascicular nucleus Present 5D
TS27: superior colliculus Present 5D
TS27: medial thalamic group Absent 5D

Specimen 5G: postnatal day 3 (more )
Structure Level Pattern Image Note
TS27: dorsal lateral geniculate nucleus Present 5G
TS27: habenula Present 5G

Specimen 6A: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb mitral cell layer Present 6A
TS28: thalamus Weak 6A

Specimen 6D: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb mitral cell layer Present 6D
TS28: thalamus Weak 6D

Specimen 6G: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb mitral cell layer Present 6G
TS28: thalamus Weak 6G

Specimen 7 1st: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb mitral cell layer Present 7_1st

Specimen 7 2nd: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: piriform cortex Present 7_2nd

Specimen 7 3rd: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present 7_3rd
TS28: piriform cortex Present 7_3rd
TS28: thalamus Trace 7_3rd

Specimen 7 4th: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present 7_4th
TS28: piriform cortex Present 7_4th
TS28: thalamus Trace 7_4th

Specimen 7 5th: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present 7_5th
TS28: hippocampus CA1 Present 7_5th
TS28: piriform cortex Present 7_5th
TS28: thalamus Trace 7_5th

Specimen 7 6th: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present 7_6th
TS28: thalamus Trace 7_6th

Specimen 7 7th: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: brain Present 7_7th

Specimen 8A: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present
TS28: hippocampus CA1 Present
TS28: piriform cortex Present
TS28: thalamus Trace 8A

Specimen 8D: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present 8D
TS28: hippocampus CA1 Present 8D
TS28: piriform cortex Present 8D
TS28: thalamus Trace 8D

Specimen 8G: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present 8G
TS28: hippocampus CA1 Present 8G
TS28: piriform cortex Present 8G
TS28: thalamus Trace 8G

Specimen 8J: postnatal adult (more )
Structure Level Pattern Image Note
TS28: thalamus Trace 8J

Specimen Table 2 E12: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: midbrain-hindbrain junction Present Regionally restricted Expression is in theolfactory bulb.
TS20: spinal cord Present Regionally restricted Expression is in theolfactory bulb.
TS20: telencephalon Present Regionally restricted Expression is in theolfactory bulb.

Specimen Table 2 E14: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: diencephalon Present
TS22: inferior colliculus Present
TS22: main olfactory bulb Present
TS22: midbrain Present
TS22: midbrain-hindbrain junction Present
TS22: pigmented retinal epithelium Present
TS22: spinal cord Present
TS22: superior colliculus Present
TS22: thalamic nucleus Present Regionally restricted Expression is in the ventral medial thalamic nucleus.
TS22: brainstem Present Regionally restricted Expression is in the red nucleus.

Specimen Table 2 E16: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: habenula Present
TS24: main olfactory bulb Present
TS24: midbrain Present
TS24: spinal cord Present
TS24: superior colliculus Present
TS24: thalamus Present
TS24: thalamic nucleus Present Regionally restricted Expression is in the ventral medial thalamic nucleus.

Specimen Table 2 E18: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: cerebellum Present
TS26: cochlea Present
TS26: dorsal lateral geniculate nucleus Present
TS26: globus pallidus Present
TS26: habenula Present
TS26: main olfactory bulb Present
TS26: reticular thalamic nucleus Present
TS26: retina Present
TS26: spinal cord Present
TS26: superior colliculus Present
TS26: thalamus Present
TS26: trigeminal ganglion Present
TS26: ventral posterior lateral thalamic nucleus Present
TS26: ventral posterior medial thalamic nucleus Present

Specimen Table 2 P3: postnatal day 3 (more )
Structure Level Pattern Image Note
TS27: cerebral cortex Present
TS27: dorsal lateral geniculate nucleus Present
TS27: habenula Present
TS27: hippocampus Present
TS27: hippocampus CA1 Present
TS27: medial geniculate nucleus Present
TS27: parafascicular nucleus Present
TS27: superior colliculus Present
TS27: thalamus Present

Specimen Table 2 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present
TS28: hippocampus Present
TS28: hippocampus CA1 Present
TS28: main olfactory bulb Present
TS28: main olfactory bulb mitral cell layer Present
TS28: thalamus Present

Specimen Table 2 P21: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: caudate-putamen Present
TS28: cerebral cortex Present
TS28: dorsomedial hypothalamic nucleus Present
TS28: endopiriform nucleus Present
TS28: hippocampus Present
TS28: hippocampus CA1 Present
TS28: lateral septal nucleus Present
TS28: main olfactory bulb glomerular layer Present
TS28: main olfactory bulb mitral cell layer Present
TS28: piriform cortex Present
TS28: red nucleus Present
TS28: subiculum Present
TS28: thalamus Present

Specimen Table 2 adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present
TS28: dentate gyrus Present
TS28: dorsal lateral geniculate nucleus Present
TS28: hippocampus Present
TS28: hippocampus CA1 Present
TS28: main olfactory bulb glomerular layer Present
TS28: main olfactory bulb mitral cell layer Present
TS28: thalamus Present


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory