Gene Expression Data
Assay Details
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Assay
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Reference:
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J:55390
Folberg A, et al., RARbeta mediates the response of Hoxd4 and Hoxb4 to exogenous retinoic acid. Dev Dyn. 1999 Jun;215(2):96-107
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:6157298
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Gene symbol:
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Hoxd4
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Gene name:
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homeobox D4
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Probe:
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BgH
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Results
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Specimen
1a:
embryonic day 9.5
(more  )
Specimen
1a:
(close  )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: central nervous system |
Strong |
Regionally restricted |
1a
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The anterior border is well posterior to the caudal edge of the otic vesicle.
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| TS15: future hindbrain |
Strong |
Regionally restricted |
1a
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With a rostral limit at the boundary between rhombomeres 6 and 7.
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| TS15: rhombomere |
Strong |
Regionally restricted |
1a
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With a rostral limit at the boundary between rhombomeres 6 and 7.
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Specimen
1d:
embryonic day 9.5
(more )
Specimen
1d:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: central nervous system |
Strong |
Regionally restricted |
1d
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The anterior border is well posterior to the caudal edge of the otic vesicle.
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| TS15: future hindbrain |
Strong |
Regionally restricted |
1d
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With a rostral limit at the boundary between rhombomeres 6 and 7.
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| TS15: rhombomere |
Strong |
Regionally restricted |
1d
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With a rostral limit at the boundary between rhombomeres 6 and 7.
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Specimen
2a:
embryonic day 9.5; Rarbtm1Vgi/ Rarbtm1Vgi
(more )
Note: Also stained for Egr2 (assay MGI:6157321) to mark rhombomere 5 underlying the otic vesicle.
Specimen
2a:
(close )
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Genetic Background:
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involves: 129S1/Sv * 129X1/SvJ * CD-1
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Mutant Allele(s):
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Rarbtm1Vgi/Rarbtm1Vgi
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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Also stained for Egr2 (assay MGI:6157321) to mark rhombomere 5 underlying the otic vesicle.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: central nervous system |
Strong |
Regionally restricted |
2a
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The anterior border is well posterior to the caudal edge of the otic vesicle, comparable to wild-type.
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| TS15: future hindbrain |
Strong |
Regionally restricted |
2a
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With a rostral limit at the boundary between rhombomeres 6 and 7, comparable to wild-type.
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| TS15: rhombomere |
Strong |
Regionally restricted |
2a
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With a rostral limit at the boundary between rhombomeres 6 and 7, comparable to wild-type.
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Specimen
2c:
embryonic day 9.5; Rarbtm1Vgi/ Rarbtm1Vgi
(more )
Note: Also stained for Egr2 (assay MGI:6157321) to mark rhombomere 5 underlying the otic vesicle.
Specimen
2c:
(close )
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Genetic Background:
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involves: 129S1/Sv * 129X1/SvJ * CD-1
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Mutant Allele(s):
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Rarbtm1Vgi/Rarbtm1Vgi
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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Also stained for Egr2 (assay MGI:6157321) to mark rhombomere 5 underlying the otic vesicle.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: central nervous system |
Strong |
Regionally restricted |
2c
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The anterior border is well posterior to the caudal edge of the otic vesicle, comparable to wild-type.
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| TS15: future hindbrain |
Strong |
Regionally restricted |
2c
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With a rostral limit at the boundary between rhombomeres 6 and 7, comparable to wild-type.
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| TS15: rhombomere |
Strong |
Regionally restricted |
2c
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With a rostral limit at the boundary between rhombomeres 6 and 7, comparable to wild-type.
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Specimen
3a:
embryonic day 9.5
(more )
Note: Flat-mount view of hindbrains.
Specimen
3a:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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Flat-mount view of hindbrains.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: future hindbrain |
Strong |
Regionally restricted |
3a
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The anterior border is well posterior to the caudal edge of the otic vesicle.
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Specimen
3d:
embryonic day 9.5; Rarbtm1Vgi/ Rarbtm1Vgi
(more )
Note: Flat-mount view of hindbrains. Also stained for Egr2 (assay MGI:6157321) to mark rhombomere 5 underlying the otic vesicle.
Specimen
3d:
(close )
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Genetic Background:
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involves: 129S1/Sv * 129X1/SvJ * CD-1
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Mutant Allele(s):
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Rarbtm1Vgi/Rarbtm1Vgi
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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Flat-mount view of hindbrains. Also stained for Egr2 (assay MGI:6157321) to mark rhombomere 5 underlying the otic vesicle.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS15: future hindbrain |
Strong |
Regionally restricted |
3d
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The anterior border is well posterior to the caudal edge of the otic vesicle, comparable to wild-type.
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