Gene Expression Data
Assay Details
Assay
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Reference:
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J:87413
Martinez-Alvarez C, et al., Snail family members and cell survival in physiological and pathological cleft palates. Dev Biol. 2004 Jan 1;265(1):207-18
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:6118053
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Gene symbol:
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Snai1
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Gene name:
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snail family zinc finger 1
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Probe:
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Snai1 probe4
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
1A:
embryonic day 13.5
(more )
Specimen
1A:
(close )
Genetic Background:
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involves: C57BL/6J
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Age:
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embryonic day 13.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Structure |
Level |
Pattern |
Image |
Note |
TS21: palatal shelf |
Strong |
Regionally restricted |
1A
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High levels of expression in medial part of each palatal shelf along the whole of its length.
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TS21: nasal septum |
Weak |
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1A
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Weaker expression in primary palate and secondary nasal septum.
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TS21: primary palate |
Weak |
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1A
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Weaker expression in primary palate and secondary nasal septum.
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Specimen
1B:
embryonic day 14.5
(more )
Specimen
1B:
(close )
Genetic Background:
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involves: C57BL/6J
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Age:
|
embryonic day 14.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
1C:
embryonic day 15.0
(more )
Specimen
1C:
(close )
Genetic Background:
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involves: C57BL/6J
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Age:
|
embryonic day 15.0
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
|
whole mount
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Fixation:
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4% Paraformaldehyde
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Structure |
Level |
Pattern |
Image |
Note |
TS23: palatal shelf |
Present |
Regionally restricted |
1C
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Expression confined to medial part of anterior half of palatal shelf. No expression at most posterior part of palatal shelves or at midline.
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TS23: primary palate |
Present |
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1C
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Specimen
1D:
embryonic day 15.5
(more )
Specimen
1D:
(close )
Genetic Background:
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involves: C57BL/6J
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Age:
|
embryonic day 15.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: palatal shelf |
Present |
Regionally restricted |
1D
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No expression at most posterior part of palatal shelves or at midline.
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Specimen
1E:
embryonic day 13.5
(more )
Specimen
1E:
(close )
Genetic Background:
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involves: C57BL/6J
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Age:
|
embryonic day 13.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Gelatin
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Specimen
1G:
embryonic day 14.5
(more )
Specimen
1G:
(close )
Genetic Background:
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involves: C57BL/6J
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Age:
|
embryonic day 14.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Gelatin
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Specimen
1I:
embryonic day 15.5
(more )
Specimen
1I:
(close )
Genetic Background:
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involves: C57BL/6J
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Age:
|
embryonic day 15.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Gelatin
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Structure |
Level |
Pattern |
Image |
Note |
TS23: palatal shelf mesenchyme |
Present |
Regionally restricted |
1I
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When palatal shelves adhere and fuse, expression concentrated in two areas at both sides of midline corresponding to condensed areas of mesenchyme.
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Specimen
1K:
embryonic day 17.5
(more )
Specimen
1K:
(close )
Genetic Background:
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involves: C57BL/6J
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Age:
|
embryonic day 17.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
|
whole mount
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Fixation:
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4% Paraformaldehyde
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Structure |
Level |
Pattern |
Image |
Note |
TS25: secondary palate |
Absent |
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1K
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No expression in either primary or secondary palate as mesenchymal condensations begin ossification process.
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Specimen
2B:
embryonic day 15.0
(more )
Specimen
2B:
(close )
Genetic Background:
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involves: C57BL/6J
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Age:
|
embryonic day 15.0
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Gelatin
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Specimen
2F:
embryonic day 15.0
(more )
Specimen
2F:
(close )
Genetic Background:
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involves: C57BL/6J
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Age:
|
embryonic day 15.0
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Gelatin
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Structure |
Level |
Pattern |
Image |
Note |
TS23: palatal shelf epithelium |
Present |
Regionally restricted |
2F
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When midline epithelial seam (MES) has formed, expression in a few cells of medial edge epithelium (MEE) extending to epithelial triangles, but not in all MEE cells.
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Specimen
3B:
(close )
Genetic Background:
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involves: 129P2/OlaHsd * C57BL/6
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Mutant Allele(s):
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Tgfb3tm1Doe/Tgfb3tm1Doe
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Age:
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embryonic day 15.0
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Gelatin
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