About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:34539 Marvulli D, et al., Spatial and temporal changes of type VI collagen expression during mouse development. Dev Dyn. 1996 Aug;206(4):447-54
Assay type: RNA in situ
MGI Accession ID: MGI:5906324
Gene symbol: Col6a1
Gene name: collagen, type VI, alpha 1
Probe: DMR2
Probe preparation: Antisense labelled with S35 RNA
Results
Specimen 2A: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: embryo Strong Regionally restricted 2A Stronger expression at 11.5 days.
TS19: head mesenchyme Very strong 2A Expression particularly intense in mesenchyme of cephalic regions and under serosae.
TS19: 1st branchial arch Strong Regionally restricted 2A Authors report strong expression in first branchial arch with preferential location in branchial region.

Specimen 2B: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: intervertebral disc Strong 2B
TS21: tongue Strong 2B
TS21: lip Present Regionally restricted 2B Expression in connective tissue of lips.
TS21: nasal mesenchyme Present Regionally restricted 2B Expression in mesenchyme underneath epithelium of nasal cavity.
TS21: alimentary system mesenchyme Present Regionally restricted 2B Expression in mesenchyme surrounding the digestive tract.

Specimen 2C: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: embryo Weak Regionally restricted 2C Expression first noted at day 10.5.
TS17: dorsal aorta Weak 2C
TS17: mesenchyme Weak Regionally restricted 2C Faint expression in meninges.
TS17: myotome Weak 2C
TS17: sclerotome Absent 2C

Specimen 2E: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: head mesenchyme Strong Regionally restricted 2E Expression particularly intense in mesenchyme of cephalic regions and under serosae.
TS17: 1st branchial arch Strong Regionally restricted 2E Strong expression in first branchial arch with preferential location in branchial region.
TS17: great vessel of heart Strong 2E

Specimen 2F: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: heart valve Strong 2F

Specimen 2G: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: intestine mesenchyme Strong Regionally restricted 2G High concentration of expression in connective tissue under luminal epithelium and serosa, outlining internal and external profile of wall.

Specimen 2H: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: lung mesenchyme Present Regionally restricted 2H Expression concentrated underneath the epithelial layers.

Specimen 2I: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: tongue Strong 2I
TS21: lip Present 2I Expression in connective tissue of lips.
TS21: nasal mesenchyme Present 2I Expression in mesenchyme underneath epithelium of nasal cavity.

Specimen 2J: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: forelimb joint Strong Regionally restricted 2J Strong expression in articular cartilage and soft tissue of joints.

Specimen 2K: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: submandibular gland mesenchyme Present Regionally restricted 2K Expression concentrated underneath the epithelial layers.

Specimen 2L: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: thoracic body wall Strong Regionally restricted 2L Strong expression in subepidermal mesenchyme, perichondrium and skeletal muscle.
TS24: dermis connective tissue Strong 2L
TS24: perichondrium Strong 2L
TS24: skeletal muscle Strong 2L


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
05/14/2024
MGI 6.23
The Jackson Laboratory