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Gene Expression Data
Assay Details
Assay
Reference: J:36589 Jen Y, et al., Expression patterns of Id1, Id2, and Id3 are highly related but distinct from that of Id4 during mouse embryogenesis. Dev Dyn. 1996 Nov;207(3):235-52
Assay type: RNA in situ
MGI Accession ID: MGI:5906182
Gene symbol: Id1
Gene name: inhibitor of DNA binding 1, HLH protein
Probe: pBS/KS-Id1sp
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 1: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: 1st branchial arch Present 1_panel 1
TS19: Rathke's pouch Present 1_panel 1
TS19: somite Present 1_panel 1
TS19: trunk mesenchyme Present Regionally restricted 1_panel 1 Expression is in mesenchyme surrounding the dorsal side of the developing stomach.

Specimen 2B: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: sclerotome Present Regionally restricted 2B Expression is in the rostral half of the sclerotome.

Specimen 2G: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: forelimb digit Present Regionally restricted 2G Expression is in the hypertrophic cartilage region and in the bony diaphysis.
TS24: radius Present Regionally restricted 2G Expression is in the hypertrophic cartilage region and in the bony diaphysis.

Specimen 2L: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cranium Present Regionally restricted 2L Expression is in the cranio-facial skeleton.
TS22: jaw skeleton Present Regionally restricted 2L Expression is in the cranio-facial skeleton.
TS22: Meckel's cartilage Present 2L
TS22: hyoid cartilage primordium Present 2L
TS22: nasal septum Present 2L
TS22: otic capsule Present 2L
TS22: sphenoid bone Present 2L
TS22: palatal shelf Present Regionally restricted 2L Expression is in ossification centers.

Specimen 2Q: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: hindlimb interdigital region mesenchyme Present 2Q
TS20: hindlimb pre-cartilage condensation Present Regionally restricted 2Q Expression is in the blastemal condenstaions where chondrification has started.

Specimen 3: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: dental papilla Present Regionally restricted 3_panel 1 Expression is in the dental papilla mesenchyme and is absent in the ondontoblasts.
TS24: enamel organ Present Regionally restricted 3_panel 1 Expression is in the ameloblast layer.
TS24: stellate reticulum Present 3_panel 1

Specimen 5F: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: stomach mesenchyme Present Regionally restricted 5F Expression is in mesenchyme surrounding the endoderm in the dorsal part.
TS22: stomach Present Regionally restricted 5F Expression is in the stomach endoderm in the dorsal part.
TS22: intestine muscularis Present 5F
TS22: intestine mesenchyme Present Regionally restricted 5F Expression is in mesenchymal cells adjacent to the epithelium.

Specimen 7: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: atrioventricular endocardial cushion Strong 7_panel 1
TS19: endocardial cushion Strong 7_panel 1
TS19: outflow tract Moderate 7_panel 1

Specimen 8A/E: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: brain blood vessel Present Regionally restricted 8A/E Expression is in the blood vessels of the meninges.

Specimen 9A/E: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: salivary gland mesenchyme Present Regionally restricted 9A/E Expression is in the mesenchymal cells surrounding the epithelium in the developing salivary gland.

Specimen not shown 8.5: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future brain neural fold Present Regionally restricted Expression is in the ridges of the unclosed neural folds.
TS13: head mesenchyme Present Regionally restricted Expression is in the cranial mesenchyme underlying the unclosed neural folds.

Specimen not shown E9.5: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: branchial arch Present
TS15: limb Present
TS15: trunk mesenchyme Very strong Regionally restricted Expression is in the mesechyme surrounding the dorsal aorta.

Specimen not shown E10.5: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: limb Present
TS17: sclerotome Present
TS17: stomach mesenchyme Present Regionally restricted Expression is in mesenchyme surrounding the endoderm in the dorsal part.
TS17: stomach Present Regionally restricted Expression is in the stomach endoderm in the dorsal part.
TS17: hindgut mesenchyme Present Regionally restricted Expression is in the mesenchyme surrounding the gut epithelium.
TS17: midgut mesenchyme Present Regionally restricted Expression is in the mesenchyme surrounding the gut epithelium.
TS17: trunk mesenchyme Very strong Regionally restricted Expression is in the mesechyme surrounding the dorsal aorta.
TS17: dermatome Weak
TS17: myotome Absent

Specimen not shown E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: stomach mesenchyme Present Regionally restricted Expression is in mesenchyme surrounding the endoderm in the dorsal part.
TS19: stomach Present Regionally restricted Expression is in the stomach endoderm in the dorsal part.
TS19: trunk mesenchyme Present Regionally restricted Expression is in the mesechyme surrounding the dorsal aorta.
TS19: hyaloid vascular plexus Present
TS19: nasal process Present
TS19: stomach epithelium Present

Specimen not shown E12.5: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: rib pre-cartilage condensation Present Regionally restricted Expression is in the perichondrium.
TS20: jaw Weak Regionally restricted Expression is in the condensed mesenchymal cells.
TS20: vibrissa mesenchyme Present Regionally restricted Expression is in the condensing mesenchyme underneath the epidermal placodes.
TS20: metanephros Present Regionally restricted Expression is in the condensed metanephric mesenchyme and renal pelvis, absent in the ureteric bud.
TS20: pancreas Present
TS20: tooth bud Present Regionally restricted Expression is in a patch of toothbud epithelium.

Specimen not shown E14.5 Tooth: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: inner enamel epithelium Present
TS22: outer enamel epithelium Present
TS22: stellate reticulum Present
TS22: tooth mesenchyme Weak Regionally restricted Expression is in the condensed mesenchyme.
TS22: cap stage tooth Present Regionally restricted

Specimen not shown E14.5: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: vibrissa root sheath Present Regionally restricted Expression is in the outer rooth sheath.
TS22: vibrissa Present Regionally restricted Expression is in the dermal papilla.
TS22: vibrissa dermal component Present Regionally restricted Expression is in the dermal sheath region.
TS22: collecting duct Present
TS22: glomerular capillary system of maturing glomerular tuft Present
TS22: hyaloid vascular plexus Present
TS22: stomach mesenchyme Present
TS22: thyroid gland Present
TS22: metanephros Present Regionally restricted Expression is in the condensed metanephric mesenchyme.
TS22: stomach glandular region Present Regionally restricted Expression is in the glandular mucosa.
TS22: stomach epithelium Weak
TS22: parathyroid gland Absent

Specimen not shown E16.5: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: brain blood vessel Present
TS24: collecting duct Present
TS24: glomerular capillary system of maturing glomerular tuft Present
TS24: heart valve Present
TS24: hyaloid vascular plexus Present
TS24: mesenchyme of metanephros Present
TS24: renal convoluted tubule Present
TS24: renal pelvis Present
TS24: vibrissa dermal papilla Present
TS24: vibrissa outer root sheath Present
TS24: vibrissa dermal component Present Regionally restricted Expression is in the dermal sheath region.
TS24: lung mesenchyme Present Regionally restricted Expression is in the mesenchymal cells surrounding the main bronchi and the smaller bronchi/bronchioles.
TS24: intestine Trace


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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory