About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:89169 Oldekamp J, et al., Expression pattern of the repulsive guidance molecules RGM A, B and C during mouse development. Gene Expr Patterns. 2004 May;4(3):283-8
Assay type: RNA in situ
MGI Accession ID: MGI:5905651
Gene symbol: Rgma
Gene name: repulsive guidance molecule family member A
Probe: mRGM A probe
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 2A: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: olfactory cortex Present Regionally restricted 2A Expression in olfactory tubercle.
TS22: piriform cortex Present 2A
TS22: eye Absent 2A

Specimen 2B: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex Strong Regionally restricted 2B Strong expression in cortical neuroepithelium.
TS22: hippocampus Present Regionally restricted 2B Increasing ventro-dorsal gradient peaking in hippocampal ventricular layer.
TS22: amygdala Present 2B
TS22: corpus striatum Present 2B
TS22: cerebellum Present 2B
TS22: cochlear duct epithelium Present 2B
TS22: lung Present Regionally restricted 2B Expression in bronchial epithelium in bronchi of medium and small caliber.
TS22: limb cartilage condensation Present 2B

Specimen 2C: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex Present Regionally restricted 2C In the cortex, expression in the neuroepithelium.
TS22: main olfactory bulb mitral cell layer Present 2C Expression in a restricted area of mantle corresponding to presumptive mitral and ventricular layers.
TS22: main olfactory bulb ventricular layer Present 2C Expression in a restricted area of mantle corresponding to presumptive mitral and ventricular layers.
TS22: telencephalon septum Present 2C
TS22: dorsal thalamus Present Regionally restricted 2C Authors report patterned expression in dorsal and ventral thalamus, as well as hypothalamus.
TS22: hypothalamus Present Regionally restricted 2C Authors report patterned expression in dorsal and ventral thalamus, as well as hypothalamus.
TS22: brainstem Present Scattered 2C
TS22: spinal cord Present Scattered 2C

Specimen 2D: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex Present Regionally restricted 2D In the cortex, expression in the neuroepithelium.
TS22: prethalamus Present Regionally restricted 2D Authors report patterned expression in dorsal and ventral thalamus, as well as hypothalamus.
TS22: diencephalon Present Regionally restricted 2D Regional expression in neuroepithelium lining the third ventricle.
TS22: pretectum Present 2D
TS22: midbrain tegmentum Present Regionally restricted 2D Expression in tectal and tegmental mantle of midbrain.
TS22: tectum Present Regionally restricted 2D Expression in tectal and tegmental mantle of midbrain.
TS22: hindbrain mantle layer Present Regionally restricted 2D In hindbrain mantle, most intense expression in inferior olive.
TS22: brainstem Present Scattered 2D
TS22: hindbrain Weak Regionally restricted 2D Intense homogeneous expression in neuroepithelial cells lining the aqueduct, fourth ventricle and central canal of spinal cord.
TS22: midbrain Weak Regionally restricted 2D Intense homogeneous expression in neuroepithelial cells lining the aqueduct, fourth ventricle and central canal of spinal cord.
TS22: spinal cord Weak Regionally restricted 2D Intense homogeneous expression in neuroepithelial cells lining the aqueduct, fourth ventricle and central canal of spinal cord.

Specimen 2E: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex Present Regionally restricted 2E In the cortex, expression in the neuroepithelium.
TS22: dorsal thalamus Present Regionally restricted 2E Authors report patterned expression in dorsal and ventral thalamus, as well as hypothalamus.
TS22: hypothalamus Present Regionally restricted 2E Authors report patterned expression in dorsal and ventral thalamus, as well as hypothalamus.
TS22: prethalamus Present Regionally restricted 2E Authors report patterned expression in dorsal and ventral thalamus, as well as hypothalamus.
TS22: mammillary area Present 2E
TS22: pretectum Present 2E
TS22: midbrain tegmentum Present Regionally restricted 2E Expression in tectal and tegmental mantle of midbrain.
TS22: tectum Present Regionally restricted 2E Expression in tectal and tegmental mantle of midbrain.
TS22: midbrain Strong Regionally restricted 2E Intense homogeneous expression in neuroepithelial cells lining the aqueduct, fourth ventricle and central canal of spinal cord.
TS22: spinal cord Strong Regionally restricted 2E Intense homogeneous expression in neuroepithelial cells lining the aqueduct, fourth ventricle and central canal of spinal cord.
TS22: cerebellum Present 2E
TS22: hindbrain Present Regionally restricted 2E Prominent expression in inferior olive.

Specimen 2F: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cochlear duct epithelium Present 2F

Specimen 2G: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: telencephalon septum Present 2G
TS22: hypothalamus Present Regionally restricted 2G Expression in anterior hypothalamic area.
TS22: dorsal thalamus Present 2G
TS22: mammillary area Present 2G
TS22: preoptic area Present 2G

Specimen 2H: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: midbrain ventricular layer Strong Regionally restricted 2H
TS22: midbrain tegmentum Weak Regionally restricted 2H Weak expression in tectal and tegmental mantle.
TS22: tectum Weak Regionally restricted 2H Weak expression in tectal and tegmental mantle.

Specimen 2I: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebellum Present 2I
TS22: hindbrain ventricular layer Present 2I

Specimen E17.5 not shown: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: brain mantle layer Present Widespread
TS25: ventricular layer Absent

Specimen 3C: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: cortical layer I Strong 3C
TS28: cortical layer II Strong 3C
TS28: cortical layer III Strong 3C
TS28: cortical layer V Strong 3C
TS28: cortical layer VI Present 3C
TS28: basal ganglia Present Scattered 3C
TS28: piriform cortex Strong 3C
TS28: caudate-putamen Present Scattered 3C
TS28: globus pallidus Present Scattered 3C
TS28: basal forebrain Moderate Widespread 3C
TS28: anterior dorsal thalamic nucleus Present 3C Regionally but differentially in hippocampal and thalamic subregions.
TS28: medial dorsal thalamic nucleus Present 3C Regionally but differentially in hippocampal and thalamic subregions.
TS28: nucleus reuniens Present 3C Regionally but differentially in hippocampal and thalamic subregions.
TS28: reticular thalamic nucleus Present 3C Regionally but differentially in hippocampal and thalamic subregions.
TS28: hippocampus CA1 Strong 3C Expression most intense in CA1.
TS28: hippocampus CA3 Present 3C
TS28: hippocampus Present Scattered 3C Expression in scattered hilar cells.
TS28: dentate gyrus Absent 3C
TS28: hippocampus stratum oriens Absent 3C

Specimen 3D: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: lateral habenular nucleus Weak 3D
TS28: medial dorsal thalamic nucleus Weak 3D
TS28: medial habenular nucleus Weak 3D


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/25/2025
MGI 6.24
The Jackson Laboratory