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Gene Expression Data
Assay Details
Assay
Reference: J:16894 Yamagata T, et al., Changes of the expression and distribution of retinoic acid receptors during neurogenesis in mouse embryos. Brain Res Dev Brain Res. 1994 Feb 18;77(2):163-76
Assay type: Immunohistochemistry
MGI Accession ID: MGI:5904052
Gene symbol: Rara
Gene name: retinoic acid receptor, alpha
Antibody: anti-RARalpha
Detection system: horseradish peroxidase
Results
Specimen 4a: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: spinal cord mantle layer Present 4a
TS20: spinal cord ventricular layer Present 4a

Specimen 16.5 day spinal cord not shown: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: spinal cord Weak Regionally restricted Weak expression in ventral region.

Specimen 5a: postnatal newborn (more )
Structure Level Pattern Image Note
TS27: spinal cord Weak Regionally restricted 5a Expression in small number of neurons in dorsal region.

Specimen 5e: postnatal newborn (more )
Structure Level Pattern Image Note
TS27: spinal cord Weak Regionally restricted 5e Figure shows expression in alar plate.

Specimen 5i: postnatal newborn (more )
Structure Level Pattern Image Note
TS27: spinal cord Weak Regionally restricted 5i Figure shows expression in basal plate.

Specimen 8a: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: hippocampus Weak 8a Expression in small number of cells in primordium of hippocampus.

Specimen 8d: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: hippocampus Strong Regionally restricted 8d Increased intensity of expression and number of expressing cells in pyramidal cell layer.

Specimen 8g: postnatal newborn (more )
Structure Level Pattern Image Note
TS27: hippocampus Weak 8g Decreased expression in newborn.

Specimen 9a: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cerebral cortex Absent 9a No expression in telencephalon (neocortex, paleocortex).

Specimen 9d: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebral hemisphere white matter Present Regionally restricted 9d Expression in surface of cingulum.

Specimen 9g: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: neocortex Absent 9g

Specimen 9j: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cerebral cortex Present Widespread 9j Increase in number of expressing cells. Expression over entire cerebral cortex.

Specimen 9m: postnatal newborn (more )
Structure Level Pattern Image Note
TS27: cerebral cortex Strong 9m Expression more intense in newborn cortex.
TS27: cortical plate Present Widespread 9m Expression in most neurons in cortical plate.
TS27: cortical subplate Present 9m Expression in subcortical plate.

Specimen ED 12.5 brain not shown: embryonic day 12.5 (more )
Note: Data presented in Table 1.
Structure Level Pattern Image Note
TS20: telencephalon Present Regionally restricted
TS20: corpus striatum Ambiguous
TS20: thalamus Absent
TS20: midbrain Present

Specimen ED 14.5 brain not shown: embryonic day 14.5 (more )
Note: Data presented in Table 1.
Structure Level Pattern Image Note
TS22: corpus striatum Ambiguous
TS22: midbrain Strong
TS22: thalamus Strong

Specimen ED 16.5 brain not shown: embryonic day 16.5 (more )
Note: Data presented in Table 1.
Structure Level Pattern Image Note
TS24: corpus striatum Strong
TS24: midbrain Strong
TS24: thalamus Strong

Specimen Newborn brain not shown: postnatal newborn (more )
Note: Data presented in Table 1.
Structure Level Pattern Image Note
TS27: corpus striatum Present
TS27: midbrain Present
TS27: thalamus Present

Specimen 10a: postnatal adult (more )
Structure Level Pattern Image Note
TS28: parietal cortex Strong 10a Authors report Rara expressed more intensely than Rarb in parietal region.

Specimen 10e: postnatal adult (more )
Structure Level Pattern Image Note
TS28: temporal lobe Present 10e

Specimen 11a: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hippocampus Absent 11a

Specimen 11e: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Present Regionally restricted 11e Expression in some but not all Purkinje cells.
TS28: cerebellum granule cell layer Present 11e

Specimen 11i: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hypothalamus Present 11i

Specimen 11m: postnatal adult (more )
Structure Level Pattern Image Note
TS28: 4th ventricle ependyma Present 11m
TS28: 4th ventricle choroid plexus Weak 11m


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory