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Gene Expression Data
Assay Details
Assay
Reference: J:22579 Lu XP, et al., An evolutionary conserved COUP-TF binding element in a neural-specific gene and COUP-TF expression patterns support a major role for COUP-TF in neural development. Mol Endocrinol. 1994 Dec;8(12):1774-88
Assay type: RNA in situ
MGI Accession ID: MGI:5897326
Gene symbol: Nr2f1
Gene name: nuclear receptor subfamily 2, group F, member 1
Probe: Coup-TF cDNA1
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Assay notes: The probe detected predominantly Nr2f1 and to a lesser extent Nr2f2.
Results
Specimen 5A: embryonic day 10.0 (more )
Note: Mouse embryo parasagittal sections were obtained from Novagen.
Structure Level Pattern Image Note
TS16: future brain Present Regionally restricted 5A Expressed in the neuroepithelium.
TS16: future spinal cord Present Regionally restricted 5A Expressed in the differentiating motoneurons. Lower expression in the neuroepithelium.
TS16: limb Present Regionally restricted 5A Expressed in the proximal part, extending more dorsally than ventrally.
TS16: 1st branchial arch mandibular component Present 5A
TS16: dermatome Present 5A
TS16: optic cup Present 5A
TS16: otocyst Present 5A
TS16: urogenital ridge Present 5A

Specimen 5B: embryonic day 10.0 (more )
Note: Mouse embryo parasagittal sections were obtained from Novagen.
Structure Level Pattern Image Note
TS16: optic cup Present Regionally restricted 5B Expressed in the area where the epithelium of the outer layer of the retina invaginates to form the inner layer.
TS16: latero-nasal process Strong 5B
TS16: medial-nasal process Absent 5B

Specimen 5C: embryonic day 10.0 (more )
Note: Mouse embryo parasagittal sections were obtained from Novagen.
Structure Level Pattern Image Note
TS16: future brain Present Regionally restricted 5C Expressed in the neuroepithelium.
TS16: future spinal cord Present Regionally restricted 5C Expressed in the differentiating motoneurons.
TS16: dermatome Present 5C

Specimen 6A: embryonic day 12.0 (more )
Note: Mouse embryo parasagittal sections were obtained from Novagen.
Structure Level Pattern Image Note
TS20: brain ventricular layer Strong Regionally restricted 6A Expressed in the neuroepitheliacl omponent of the different brain vesicles, in proximity of the ventricles.
TS20: fronto-nasal process mesenchyme Strong 6A
TS20: neocortex Strong 6A
TS20: cochlea epithelium Present 6A
TS20: heart atrium Present 6A
TS20: lung Present 6A
TS20: medulla oblongata Present 6A
TS20: mesonephros Present 6A
TS20: metencephalon Present 6A
TS20: midgut Present 6A
TS20: pancreas Present 6A
TS20: pericardium Present 6A
TS20: choroid plexus Present 6A Moderately strong labeling.
TS20: spinal cord Strong Widespread 6A
TS20: trigeminal ganglion Moderate 6A
TS20: trigeminal nerve Moderate 6A
TS20: stomach Present Graded 6A Expressed in a ventrodorsal gradient.
TS20: esophagus Present Regionally restricted 6A Expressed in its abdominal part.
TS20: heart ventricle Absent 6A
TS20: genital tubercle Strong Regionally restricted 6A Expressed in the distal part.
TS20: liver Trace 6A

Specimen 6B: embryonic day 12.0 (more )
Note: Mouse embryo parasagittal sections were obtained from Novagen.
Structure Level Pattern Image Note
TS20: spinal cord Strong Widespread 6B
TS20: dorsal root ganglion Very strong 6B
TS20: sclerotome Absent 6B
TS20: stomach Present Graded 6B Expressed in a ventrodorsal gradient.

Specimen 7A: embryonic day 14.0 (more )
Note: Mouse embryo parasagittal sections were obtained from Novagen.
Structure Level Pattern Image Note
TS22: telencephalon Present 7A
TS22: cerebellum Strong 7A Relatively strong.
TS22: neocortex Strong 7A Relatively strong.

Specimen 7B: embryonic day 14.0 (more )
Note: Mouse embryo parasagittal sections were obtained from Novagen.
Structure Level Pattern Image Note
TS22: cerebellum Strong 7B Relatively strong.
TS22: neocortex Strong 7B Relatively strong.
TS22: choroid plexus Weak 7B

Specimen 7C: embryonic day 14.0 (more )
Note: Mouse embryo parasagittal sections were obtained from Novagen.
Structure Level Pattern Image Note
TS22: retina Weak Regionally restricted 7C Mostly in the outer nuclear layer.
TS22: lens Absent 7C
TS22: pigmented retinal epithelium Absent 7C
TS22: perioptic mesenchyme Present Regionally restricted 7C Expressed in a layer of condensed mesenchyme surrounding the eye.

Specimen 7D: embryonic day 16.0 (more )
Note: Mouse embryo parasagittal sections were obtained from Novagen.
Structure Level Pattern Image Note
TS24: limb mesenchyme Trace Regionally restricted 7D Very low expression in some areas of condensed mesenchyme.

Specimen 7E: embryonic day 16.0 (more )
Note: Mouse embryo parasagittal sections were obtained from Novagen.
Structure Level Pattern Image Note
TS24: vibrissa follicle Present Regionally restricted 7E Expressed in the dermal cells surrounding the whisker follicles.

Specimen not shown: embryonic day 12.0 (more )
Note: Mouse embryo parasagittal sections were obtained from Novagen.
Structure Level Pattern Image Note
TS20: midbrain Present Regionally restricted Expressed in the anterior part.
TS20: retina Weak Uniform
TS20: perioptic mesenchyme Weak

Specimen not shown: embryonic day 14.0 (more )
Note: Mouse embryo parasagittal sections were obtained from Novagen.
Structure Level Pattern Image Note
TS22: liver Absent
TS22: lung Absent
TS22: small intestine Absent
TS22: testis Absent
TS22: adrenal gland Weak
TS22: dorsal root ganglion Weak
TS22: metanephros Weak
TS22: male reproductive system Weak Regionally restricted Expressed in mesonephritic tissues, which will give rise to the vas deferens and the epididymis.
TS22: limb mesenchyme Weak Regionally restricted Expressed in some areas of condensed mesenchyme.

Specimen not shown: embryonic day 16.0 (more )
Note: Mouse embryo parasagittal sections were obtained from Novagen.
Structure Level Pattern Image Note
TS24: liver Absent


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory