Gene Expression Data
Assay Details
Assay
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Reference:
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J:38203
Korematsu K, et al., Restricted expression of cadherin-8 in segmental and functional subdivisions of the embryonic mouse brain. Dev Dyn. 1997 Feb;208(2):178-89
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5827986
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Gene symbol:
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Cdh8
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Gene name:
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cadherin 8
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Probe:
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mCad8-PCR
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
|
|
Results
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Specimen
3a:
embryonic day 12.5
(more )
Specimen
3a:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
4a:
embryonic day 12.5
(more )
Specimen
4a:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
4b:
embryonic day 14.0
(more )
Specimen
4b:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 14.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
5a:
embryonic day 12.5
(more )
Specimen
5a:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: thalamus |
Present |
Regionally restricted |
5a
|
Expressed in the ventral thalamus, in particular regions of the intermediate and mantle layers where early neurons aggregate into brain nuclei and differentiate.
|
TS20: thalamus mantle layer |
Present |
Regionally restricted |
5a
|
Expressed in the ventral thalamus.
|
TS20: thalamus ventricular layer |
Present |
Regionally restricted |
5a
|
Expressed in the ventral thalamus.
|
Specimen
5e:
embryonic day 12.5
(more )
Specimen
5e:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: thalamus |
Present |
Regionally restricted |
5e
|
Expressed in the ventral thalamus, in particular regions of the intermediate and mantle layers where early neurons aggregate into brain nuclei and differentiate.
|
TS20: thalamus mantle layer |
Present |
Regionally restricted |
5e
|
Expressed in the ventral thalamus.
|
TS20: thalamus ventricular layer |
Present |
Regionally restricted |
5e
|
Expressed in the ventral thalamus.
|
Specimen
5f:
embryonic day 12.5
(more )
Specimen
5f:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: cerebral cortex |
Present |
|
5f
|
|
TS20: ganglionic eminence |
Present |
Regionally restricted |
5f
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Expressed in the ventricular layer ubiquitously.
|
TS20: telencephalon |
Present |
Regionally restricted |
|
Expressed in the caudatopallial angle. There is a sharp border of expression between the cells at the caudato-pallial angle and the intermediate zone of the lateral ganglionic eminence and is contiguous with that of early parietal cortex.
|
Specimen
6b:
embryonic day 12.5
(more )
Specimen
6b:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: cerebral cortex |
Present |
|
6b
|
|
TS20: medial ganglionic eminence |
Present |
Regionally restricted |
6b
|
Expressed in the ventricular layer ubiquitously. Low expression in the mantle zone of the medial ganglionic eminence.
|
TS20: telencephalon |
Present |
Regionally restricted |
6b
|
Expressed in the caudatopallial angle. There is a sharp border of expression between the cells at the caudato-pallial angle and the intermediate zone of the lateral ganglionic eminence and is contiguous with that of early parietal cortex.
|
Specimen
6c:
embryonic day 12.5
(more )
Specimen
6c:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: cerebral cortex |
Present |
|
6c
|
|
TS20: telencephalon |
Present |
Regionally restricted |
6c
|
Expressed in the caudatopallial angle. There is a sharp border of expression between the cells at the caudato-pallial angle and the intermediate zone of the lateral ganglionic eminence and is contiguous with that of early parietal cortex.
|
TS20: medial ganglionic eminence |
Present |
Regionally restricted |
6c
|
Expressed in the ventricular layer ubiquitously. Low expression in the mantle zone of the medial ganglionic eminence.
|
Specimen
7a:
embryonic day 11.5
(more )
Specimen
7a:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
7b:
embryonic day 12.5
(more )
Specimen
7b:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: hindbrain |
Present |
Regionally restricted |
7b
|
Expressed in a streak of cells extending from the midventricular zone to the pial surface, where they are especially prominent.
|
TS20: pons |
Present |
|
7b
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Moderate to high levels.
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Specimen
7c:
embryonic day 12.5
(more )
Specimen
7c:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: hindbrain |
Present |
Regionally restricted |
7c
|
Expressed in a streak of cells extending from the midventricular zone to the pial surface, where they are especially prominent.
|
Specimen
7d:
embryonic day 14.0
(more )
Specimen
7d:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 14.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: brain nucleus |
Present |
Regionally restricted |
7d
|
Expressed in the anlage of the facial nucleus and pontine nucleus.
|
Specimen
7e:
embryonic day 14.0
(more )
Specimen
7e:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 14.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: brain nucleus |
Present |
Regionally restricted |
7e
|
Expressed in the anlage of the facial nucleus.
|
Specimen
8a:
embryonic day 12.5
(more )
Specimen
8a:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: brain |
Present |
Regionally restricted |
8a
|
Expressed in the anlage of the pontine nucleus.
|
Specimen
8b:
embryonic day 12.5
(more )
Specimen
8b:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: hindbrain mantle layer |
Weak |
Regionally restricted |
8b
|
Expressed in a thin cord of cells that extends along the longitudinal axis of the hindbrain from the pons to the spinal cord, located in the lateral mantle zone in close proximity to the ventricular layer. Also expressed in another small bilateral cell cord, medially to the previous cord.
|
Specimen
8c:
embryonic day 12.5
(more )
Specimen
8c:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: hindbrain |
Weak |
Regionally restricted |
8c
|
Expressed in a thin cord of cells that extends along the longitudinal axis of the hindbrain from the pons to the spinal cord. Located in the lateral mantle zone in close proximity to the ventricular layer.
|
Specimen
not shown:
embryonic day 9.5
(more )
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
not shown:
embryonic day 11.0
(more )
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 11.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
not shown:
embryonic day 11.5
(more )
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: diencephalon |
Present |
Regionally restricted |
|
Expressed in the ventricular and mantle layers of the ventral thalamus.
|
Specimen
not shown:
embryonic day 12.0
(more )
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: thalamus |
Present |
Regionally restricted |
|
Expressed in the ventricular and mantle layers of the ventral thalamus.
|
Specimen
not shown:
embryonic day 12.5
(more )
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
not shown:
embryonic day 14.0
(more )
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 14.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
|