About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:32248 Lints TJ, et al., Mesoderm-specific expression of the divergent homeobox gene Hlx during murine embryogenesis. Dev Dyn. 1996 Apr;205(4):457-70
Assay type: RNA in situ
MGI Accession ID: MGI:5827771
Gene symbol: Hlx
Gene name: H2.0-like homeobox
Probe: Hlc cDNA3
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 1B: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: mesenchyme derived from splanchnopleure Present Regionally restricted 1B Expression is in the splanchnic mesoderm caudal to the level of the anterior intestinal portal and heart with an anterior border at the position of the future midgut/hindgut junction.
TS15: secondary heart field Absent 1B

Specimen 1C: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: mesenchyme derived from splanchnopleure Present Regionally restricted 1C Expression is in the splanchnic mesoderm caudal to the level of the anterior intestinal portal and heart with an anterior border at the position of the future midgut/hindgut junction.

Specimen 1D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: mesenchyme derived from splanchnopleure Present Regionally restricted 1D Expression is in the splanchnic mesoderm caudal to the level of the anterior intestinal portal and heart with an anterior border at the position of the future midgut/hindgut junction.

Specimen 1F: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: midgut mesenchyme Present Regionally restricted 1F Expression has an anterior boundary of expression within the duodenal region at the level of the liver diverticulum.

Specimen 1G: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: gut mesenchyme Present 1G
TS17: gut mesentery Present 1G Expression is in dorsal mesentery.
TS17: gut endoderm Absent 1G

Specimen 1H: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: hindgut mesenchyme Present 1H
TS19: lung Present 1H
TS19: midgut mesenchyme Present 1H

Specimen 2B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: trunk mesenchyme Strong Regionally restricted 2B Expression is strong in the mesenchyme surrounding the liver, gall bladder, and intestine. Absent in mesenchyme surrounding the stomach, oesophagus, trachea, and lung bronchi.
TS17: gut mesentery Strong 2B
TS17: lung mesenchyme Present 2B
TS17: esophagus Absent 2B
TS17: stomach Absent 2B

Specimen 2C: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: trunk mesenchyme Strong Regionally restricted 2C Expression is strong in the mesenchyme surrounding the liver, gall bladder, and intestine.
TS17: gut mesentery Strong 2C
TS17: duodenum Present Regionally restricted 2C The anterior boundary of expression is within the duodenum, just caudal to the stomach constriction.
TS17: foregut-midgut junction mesenchyme Present 2C
TS17: lung mesenchyme Present 2C
TS17: midgut mesenchyme Present 2C
TS17: intraembryonic coelom Present Regionally restricted 2C Expression is in the lining of the coelomic and pericardial cavities.
TS17: pericardial cavity Present Regionally restricted 2C Expression is in the lining of the coelomic and pericardial cavities.
TS17: esophagus Absent 2C
TS17: stomach Absent 2C

Specimen 2E: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: liver Strong 2E
TS20: duodenum Present Regionally restricted 2E The anterior border of expression is within the duodenum.
TS20: gut Present Regionally restricted 2E The anterior border of expression is within the duodenum.
TS20: lung Weak 2E
TS20: esophagus Absent 2E
TS20: stomach Absent 2E

Specimen 2F: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: liver Strong 2F
TS20: duodenum Present Regionally restricted 2F The anterior border of expression is within the duodenum.
TS20: gut Present Regionally restricted 2F The anterior border of expression is within the duodenum.
TS20: rib pre-cartilage condensation Present Regionally restricted 2F Expression is at the periphery with little or no expression in the chondrogenic condensations.
TS20: lung mesenchyme Weak 2F
TS20: esophagus Absent 2F
TS20: pancreas mesenchyme Absent 2F
TS20: stomach Absent 2F

Specimen 4B: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: 2nd branchial arch Present Regionally restricted 4B Expression is in loosely arranged cells.

Specimen 4C: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: 1st branchial arch Present Regionally restricted 4C Expression is in compact clusters centrally located.
TS17: 2nd branchial arch Present Regionally restricted 4C Expression is in compact clusters centrally located.
TS17: 3rd branchial arch Present Regionally restricted 4C Expression is in compact clusters centrally located.
TS17: 4th branchial arch Present Regionally restricted 4C Expression is in compact clusters centrally located.

Specimen 5A: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: forelimb mesenchyme Present Regionally restricted 5A Expression is in dorsal and ventral myogenic masses.

Specimen 6H: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: rib pre-cartilage condensation Present 6H
TS19: vertebral cartilage condensation Present Regionally restricted 6H Expression is in the neural arches.
TS19: intraembryonic coelom Present Regionally restricted 6H Expression is in the lining of the coelomic and pericardial cavities.
TS19: pericardial cavity Present Regionally restricted 6H Expression is in the lining of the coelomic and pericardial cavities.

Specimen 7F: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: vibrissa dermal component Present Regionally restricted 7F Expression is in a dermal sheath immediately adjacent to the outer root sheath, proximal to the epidermis, and descending to the level of the sebaceous glands.

Specimen 7G: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: vibrissa dermal component Present Regionally restricted 7G Expression is in a dermal sheath immediately adjacent to the outer root sheath, proximal to the epidermis, and descending to the level of the sebaceous glands.

Specimen Table 1 9.5: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: mesenchyme derived from splanchnopleure Strong Regionally restricted Expreession is caudal to the heart.
TS15: branchial arch Moderate Regionally restricted Expression is in myogenic cells.

Specimen Table 1 10.5: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: septum transversum Strong Regionally restricted Expression is surrounding the liver diverticulum.
TS17: liver Strong Regionally restricted Expression is in the capsule and endothelial cells.
TS17: gallbladder primordium Strong Regionally restricted Expression is in the mesenchyme.
TS17: duodenum Strong Regionally restricted Expression is in the mesenchyme caudal (midgut) segment.
TS17: hindgut mesenchyme Strong
TS17: lung mesenchyme Strong
TS17: midgut mesenchyme Strong
TS17: branchial arch Moderate Regionally restricted Expression is in myogenic cells.
TS17: intraembryonic coelom Moderate Regionally restricted Expression is in the lining opposite the forelimb bud, adjacent to lung buds and liver.
TS17: sclerotome Weak Regionally restricted Expression is in the latero-caudal region, progenitors of ribs and neural arches.
TS17: brain Weak Regionally restricted Expression is in the meningeal epithelium.
TS17: future spinal cord Weak Regionally restricted Expression is in the meningeal epithelium.

Specimen Table 1 11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: liver Strong Regionally restricted Expression is in the capsule and endothelial cells.
TS19: gallbladder Strong Regionally restricted Expression is in the mesenchyme.
TS19: duodenum mesenchyme Strong Regionally restricted Expression is in the caudal (midgut) segment.
TS19: hindgut mesenchyme Strong
TS19: midgut mesenchyme Strong
TS19: intraembryonic coelom Strong Regionally restricted Expression is in the connective tissue of the diaphragm.
TS19: lung mesenchyme Moderate
TS19: pericardial cavity Moderate
TS19: limb Moderate Regionally restricted Expression is in myogenic cells, periosteal regions, and interdigital spaces.
TS19: sclerotome Moderate Regionally restricted Expression is in the latero-caudal region, progenitors of ribs and neural arches.
TS19: branchial arch Weak Regionally restricted Expression is in myogenic cells.
TS19: brain Weak Regionally restricted Expression is in the meningeal epithelium.
TS19: future spinal cord Weak Regionally restricted Expression is in the meningeal epithelium.

Specimen Table 1 12.5: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: liver Moderate Regionally restricted Expression is in the capsule and endothelial cells.
TS20: gallbladder Moderate Regionally restricted Expression is in the mesenchyme.
TS20: duodenum mesenchyme Moderate Regionally restricted Expression is in the caudal (midgut) segment.
TS20: hindgut mesenchyme Moderate
TS20: midgut mesenchyme Moderate
TS20: pericardial cavity Moderate
TS20: diaphragm Moderate Regionally restricted Expression is in the connective tissue.
TS20: sclerotome Moderate Regionally restricted Expression is in the latero-caudal region, progenitors of ribs and neural arches.
TS20: brain meninges Weak
TS20: limb interdigital region Weak
TS20: lung mesenchyme Weak
TS20: limb Weak Regionally restricted Expression is in myogenic cells and in periosteal regions.
TS20: meninges Weak Regionally restricted Expression is in the meningeal epithelium of the spinal cord.

Specimen Table 1 14.5: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: vibrissa follicle Moderate Regionally restricted Expression is in the dermal sheath.
TS22: face mesenchyme Moderate Regionally restricted Expression is in the snout mesenchyme.
TS22: liver Weak Regionally restricted Expression is in the capsule and endothelial cells.
TS22: gallbladder Weak Regionally restricted Expression is in the mesenchyme.
TS22: duodenum mesenchyme Weak Regionally restricted Expression is in the caudal (midgut) segment.
TS22: diaphragm Weak Regionally restricted Expression is in the connective tissue.
TS22: hindgut mesenchyme Weak
TS22: limb interdigital region Weak
TS22: midgut mesenchyme Weak
TS22: pericardial cavity Weak
TS22: limb Weak Regionally restricted Expression is in myogenic cells and in periosteal regions.
TS22: sclerotome Weak Regionally restricted Expression is in the latero-caudal region, progenitors of ribs and neural arches.

Specimen not shown E7.5: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: embryo Absent

Specimen not shown E8.5: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: embryo Absent

Specimen not shown E11.0: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS19: limb mesenchyme Absent

Specimen not shown E12.5: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: diaphragm Present
TS20: intestine mesenchyme Present
TS20: hindlimb mesenchyme Present Regionally restricted Expression is in dorsal and ventral myogenic masses.

Specimen not shown E14.5: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: diaphragm Present
TS22: intestine mesenchyme Present
TS22: rib cartilage condensation Present Regionally restricted Expression is at the periphery with little or no expression in the chondrogenic condensations.
TS22: limb mesenchyme Weak Regionally restricted Expression is in peri-muscular regions.
TS22: cranial muscle Absent


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
04/23/2024
MGI 6.23
The Jackson Laboratory