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Gene Expression Data
Assay Details
Assay
Reference: J:9353 Sharpe PT, et al., Isolation and expression of a new mouse homeobox gene. Development. 1988 Feb;102(2):397-407
Assay type: RNA in situ
MGI Accession ID: MGI:5818864
Gene symbol: Hoxc6
Gene name: homeobox C6
Probe: Hox-6.1 cDNA2
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Assay notes: Probes were hydrolyzed by alkaline hydrolysis.
Results
Specimen 6: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: spinal cord Very strong Regionally restricted 6D , 6A , 6C Expression is just posterior to the hindbrain and extends caudally.
TS20: thoracic vertebral cartilage condensation Present 6D , 6C Strongest expression is in prevertebrae 9-16.
TS20: C7 vertebral cartilage condensation Weak 6D , 6C
TS20: gonad Present 6C
TS20: lumbar vertebral cartilage condensation Present 6C
TS20: lung mesenchyme Present 6C
TS20: metanephros Present 6C
TS20: sacral vertebral cartilage condensation Present 6C
TS20: stomach Present 6C
TS20: intestine Present Regionally restricted 6C Expression is in some regions.
TS20: C1 vertebral cartilage condensation Absent 6C
TS20: C2 vertebral cartilage condensation Absent 6C
TS20: C3 vertebral cartilage condensation Absent 6C
TS20: C4 vertebral cartilage condensation Absent 6C
TS20: C5 vertebral cartilage condensation Absent 6C
TS20: C6 vertebral cartilage condensation Absent 6C
TS20: brain Absent 6C
TS20: lung epithelium Absent 6C

Specimen not shown: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: heart Absent
TS20: liver Absent

Specimen 7: embryonic day 8.5 (more )
Note: 6-somite stage embryo
Structure Level Pattern Image Note
TS13: embryo ectoderm Present Regionally restricted 7 Expression is in the posterior region.
TS13: embryo mesoderm Present Regionally restricted 7 Expression is posterior to somite 6 and extends caudally to the allantois.
TS13: trunk unsegmented mesenchyme Present Regionally restricted 7 Expression is in the presomitic mesoderm posterior to somite 6.
TS13: amnion Absent 7
TS13: chorion Absent 7
TS13: head somite Absent 7
TS13: trunk somite Absent 7
TS13: umbilical cord Absent 7

Specimen 7 Adult: postnatal adult (more )
Note: gestational day E8.5
Structure Level Pattern Image Note
TS28: decidua Absent 7


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory