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Gene Expression Data
Assay Details
Assay
Reference: J:223387 Goff LA, et al., Spatiotemporal expression and transcriptional perturbations by long noncoding RNAs in the mouse brain. Proc Natl Acad Sci U S A. 2015 Jun 2;112(22):6855-62
Assay type: In situ reporter (knock in)
MGI Accession ID: MGI:5805501
Gene symbol: Lncenc1
Gene name: long non-coding RNA, embryonic stem cells expressed 1
Reporter: lacZ
Direct Detection
Results
Specimen 1A: embryonic day 14.5; Lncenc1tm1Vlcg/Lncenc1+ (more )
Structure Level Pattern Image Note
TS22: telencephalon ventricular layer Present Regionally restricted 1A Expression was detected in the ventricular zone of the ventral telencephalon, but not of the dorsal telencephalon.
TS22: cerebral cortex intermediate zone Present 1A
TS22: cortical plate Present Regionally restricted 1A Expression was in the lateral cortical plate.

Specimen 1B: postnatal week 7.6-14.1; Lncenc1tm1Vlcg/Lncenc1+ (more )
Structure Level Pattern Image Note
TS28: cortical layer II Present Regionally restricted 1B , 1B upper right Expression was detected in layers II/III of the primary somatosensory cortex of the trunk and layer IV of the primary somatosensory barrel field.
TS28: cortical layer III Present Regionally restricted 1B , 1B upper right Expression was detected in layers II/III of the primary somatosensory cortex of the trunk and layer IV of the primary somatosensory barrel field.
TS28: cortical layer IV Present Regionally restricted 1B , 1B upper right Expression was detected in layers II/III of the primary somatosensory cortex of the trunk and layer IV of the primary somatosensory barrel field.
TS28: primary somatosensory cortex Present Regionally restricted 1B , 1B upper right Expression was detected in layers II/III of the primary somatosensory cortex of the trunk and layer IV of the primary somatosensory barrel field.
TS28: dentate gyrus granule cell layer Present 1B lower right , 1B
TS28: dentate gyrus hilus Present 1B lower right , 1B
TS28: dentate gyrus molecular layer Present 1B lower right , 1B
TS28: hippocampus CA1 Present 1B lower right , 1B
TS28: hippocampus CA2 Present 1B lower right , 1B
TS28: hippocampus CA3 Present 1B lower right , 1B

Specimen Dataset 2: postnatal week 7.6-14.1; Lncenc1tm1Vlcg/Lncenc1+ (more )
Structure Level Pattern Image Note
TS28: brain Present Dataset S2 Lincenc1


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory