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Gene Expression Data
Assay Details
Assay
Reference: J:137253 Plachez C, et al., Nuclear factor I gene expression in the developing forebrain. J Comp Neurol. 2008 May 20;508(3):385-401
Assay type: Immunohistochemistry
MGI Accession ID: MGI:5792127
Gene symbol: Nfib
Gene name: nuclear factor I/B
Antibody: Anti-NFIB
Detection system: Secondary antibody coupled to horseradish peroxidase
Results
Specimen 1F: postnatal; Nfibtm1Rmg/Nfibtm1Rmg (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS28: brain Absent 1F

Specimen 1G: postnatal (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS28: brain Present 1G

Specimen 2B/B': embryonic day 12.5 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS20: telencephalon Present Regionally restricted 2B , 2B' Expressed in the roofplate.

Specimen 2D/D': embryonic day 13.5 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS21: cortical preplate Present 2D , 2D'

Specimen 2F/F': embryonic day 15.5 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS23: neocortex Present Regionally restricted 2F' , 2F Expressed in layer VI.
TS23: cerebral cortex marginal layer Present 2F , 2F'
TS23: cortical subplate Present 2F , 2F'

Specimen 2H/H': embryonic day 17.5 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS25: cerebral cortex marginal zone Present 2H , 2H'
TS25: cerebral cortex subventricular zone Present 2H , 2H'
TS25: cerebral cortex ventricular zone Present 2H , 2H'
TS25: cortical subplate Present 2H , 2H'
TS25: neocortex Present Regionally restricted 2H' , 2H Expressed in layer VI.

Specimen 3B/B': postnatal day 0 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS27: cortical layer IV Present 3B' , 3B

Specimen 3D/D': postnatal day 7 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS28: cortical layer IV Present 3D , 3D'

Specimen 3F/F': postnatal day 14 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS28: cortical layer IV Present 3F' , 3F Reduced expression.

Specimen 3H/H': postnatal adult (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS28: piriform cortex Absent 3H , 3H'
TS28: cerebral cortex Present 3H' , 3H Reduced expression.

Specimen 4B/B': embryonic day 13.5 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS21: neocortex Present Uniform 4B' , 4B

Specimen 4D/D': embryonic day 15.5 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS23: neocortex Present Uniform 4D , 4D'

Specimen 4F/F': embryonic day 17.5 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS25: neocortex Present Uniform 4F' , 4F

Specimen 4H/H'/H"/H'": postnatal day 7 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS28: neocortex Present Non-Uniform 4H , 4H" , 4H'" , 4H' A graded expression in layers II/IIl. No differences in the distribution over the rostrocaudal axis in deep layers.

Specimen 4J/J'/J"/J'": postnatal day 14 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS28: neocortex Present Non-Uniform 4J , 4J'" , 4J" , 4J' A graded expression in layers II/IIl. No differences in the distribution over the rostrocaudal axis in deep layers.

Specimen 8B: embryonic day 15.5 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS23: neocortex Strong Regionally restricted 8B Expressed in the cingulate cortex.
TS23: cerebral cortex Strong Regionally restricted 8B Expressed in the cingulate cortex, but not in the midline glial populations.

Specimen 8D: embryonic day 18.5 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS26: cerebral cortex Present Regionally restricted 8D Increased expression in the indusium griseum, the glial wedge, and also in the subcallosal sling.

Specimen 8F: postnatal day 0 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS27: cerebral cortex Present Regionally restricted 8F Expressed in the indusium griseum, the glial wedge, and also in the subcallosal sling.

Specimen 8H: postnatal day 14 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS28: cerebral cortex ventricular zone Present 8H
TS28: cerebral cortex Present Regionally restricted 8H Expression at the midline was lower than NFIA expression.

Specimen 8J/J': postnatal adult (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS28: cerebral cortex subventricular zone Present 8J
TS28: cerebral cortex ventricular zone Present 8J
TS28: cerebral cortex Present Regionally restricted 8J , 8J' Expressed in the indusium griseum. Expression of NFIA was more dorsomedially than the NFIB-expressing cells.

Specimen 9B/B': embryonic day 12.5 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS20: prethalamus Present 9B
TS20: optic chiasma Absent 9B , 9B'
TS20: telencephalon Present Regionally restricted 9B Expressed in the ventral thalamus. No expression in the amygdala.
TS20: thalamus Present Regionally restricted 9B Expressed in posterior thalamus.
TS20: hypothalamus Present 9B

Specimen 9D/D': embryonic day 13.5 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS21: prethalamus Present 9D
TS21: optic chiasma Absent 9D , 9D'
TS21: telencephalon Present Regionally restricted 9D Expressed in the ventral thalamus. No expression in the amygdala.
TS21: thalamus Present Regionally restricted 9D Expressed in posterior thalamus.
TS21: hypothalamus Present 9D

Specimen 10B/B': embryonic day 13.5 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS21: telencephalon Present Regionally restricted 10B , 10B' Expressed in the hippocampal primordium.

Specimen 10D/D': embryonic day 15.5 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS23: hippocampus Present Regionally restricted 10D , 10D' Expression was highest in the hippocampal stratum radiatum.

Specimen 10F/F': embryonic day 17.5 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS25: dentate gyrus Present 10F , 10F'
TS25: hippocampus Present Regionally restricted 10F' , 10F Expressed in the stratum oriens. No expression in the stratum radiatum.

Specimen 11B/B'/B"/B'": postnatal day 5 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS28: dentate gyrus Strong 11B'" , 11B , 11B' , 11B"
TS28: dentate gyrus granule cell layer Strong 11B'" , 11B , 11B' , 11B"
TS28: CA1 pyramidal cell layer Absent 11B' , 11B , 11B"
TS28: CA2 pyramidal cell layer Absent 11B' , 11B , 11B"
TS28: CA3 pyramidal cell layer Absent 11B' , 11B , 11B"

Specimen 11D/D': postnatal day 7 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS28: dentate gyrus Strong 11D' , 11D
TS28: dentate gyrus granule cell layer Strong 11D' , 11D

Specimen 11F/F': postnatal day 14 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS28: dentate gyrus Strong 11F , 11F'
TS28: dentate gyrus granule cell layer Strong 11F , 11F'

Specimen 11H/H'/H"/H'": postnatal adult (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS28: dentate gyrus Strong 11H" , 11H , 11H'" , 11H'
TS28: dentate gyrus granule cell layer Strong 11H" , 11H , 11H'" , 11H'

Specimen not shown: postnatal day 2 (more )
Note: Vibratome section.
Structure Level Pattern Image Note
TS27: thalamus Absent


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory