About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:226855 Iwasaki Y, et al., Expression profiles of inka2 in the murine nervous system. Gene Expr Patterns. 2015 Sep-Nov;19(1-2):83-97
Assay type: RNA in situ
MGI Accession ID: MGI:5790395
Gene symbol: Inka2
Gene name: inka box actin regulator 2
Probe: inka2 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 3A: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: acoustic ganglion Present 3A
TS17: dorsal root ganglion Present 3A
TS17: facial ganglion Present 3A
TS17: migrating neural crest Present 3A
TS17: telencephalon Present 3A
TS17: trigeminal ganglion Present 3A

Specimen 3C: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: telencephalon Present 3C

Specimen 3D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: telencephalon Present 3D

Specimen 3E: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: dorsal root ganglion Present 3E

Specimen 3F: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: acoustic ganglion Present 3F
TS17: facial ganglion Present 3F
TS17: trigeminal ganglion Present 3F
TS17: telencephalon Present Scattered 3F Expression is in the superficial thin layer of the telencephalon, absent in neuroepithelial cells.
TS17: telencephalon ventricular layer Absent 3F

Specimen 3G: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: telencephalon Present Scattered 3G Expression is in the superficial thin layer of the telencephalon, absent in neuroepithelial cells.
TS17: telencephalon ventricular layer Absent 3G

Specimen 3H: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: hindbrain Strong Regionally restricted 3H Expression is in narrow stripes adjacent to the floor plate.

Specimen 3I: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: hindbrain Strong Regionally restricted 3I Expression is in narrow stripes adjacent to the floor plate.

Specimen 4A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: telencephalon Present Regionally restricted 4A Expression is in the surface area covering the entire telencephalic vesicle and in the bed nucleus of stria terminalis.

Specimen 4B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: telencephalon Present Regionally restricted 4B Expression is in the surface area covering the entire telencephalic vesicle.

Specimen 4C: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: telencephalon Strong Regionally restricted 4C Expression is in the superficial layer of the medial telencephalic wall and the caudal telencephalic wall covering the hippocampus region.
TS22: telencephalon septum Present Regionally restricted 4C Expression is in the bed nucleus of stria terminalis.

Specimen 4D: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: telencephalon Present 4D Expression is in the superficial layer of the medial telencephalic wall and the caudal telencephalic wall covering the hippocampus region.

Specimen 4E: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: medulla oblongata ventricular layer Present Regionally restricted 4E Expression is ventral.
TS22: hindbrain Present Regionally restricted 4E Expression is in scattered cells over the ventral and lateral parenchyma of the hindbrain.

Specimen 4F,G: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: medulla oblongata ventricular layer Present Regionally restricted 4G , 4F Expression is ventral.

Specimen 4H: embryonic day 16.5 (more )
Note: (G) is a higher magnification.
Structure Level Pattern Image Note
TS24: medulla oblongata Present 4H
TS24: pons Present 4H
TS24: telencephalon Present Regionally restricted 4H Expression is in the anterior part and is absent in the superficial layer.

Specimen 4I: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cerebral cortex Present Single cells 4I There are sparsely distributed positive cells across the cortical layers, absent on the cortical surface.

Specimen 4J,K: embryonic day 16.5 (more )
Note: (K) is a higher magnification.
Structure Level Pattern Image Note
TS24: forebrain Present Regionally restricted 4J Expression is in the ventral forebrain, absent on the cortical surface.
TS24: thalamus Present 4K , 4J Expression is in the ventral thalamus.
TS24: amygdala Present 4J
TS24: basal ganglia Present 4J
TS24: hypothalamus Present 4J
TS24: piriform cortex Present 4J
TS24: telencephalon septum Present 4J

Specimen 5A,C: embryonic day 13.5 (more )
Note: (C) is a higher magnification of the boxed area in (A).
Structure Level Pattern Image Note
TS21: hindbrain ventricular layer Present Regionally restricted 5C , 5A Expression is in the ventral ventricular zone surrounding the 4th ventricle.

Specimen 5E,G: embryonic day 13.5 (more )
Note: (G) is a higher magnification of the ventral area in (E).
Structure Level Pattern Image Note
TS21: spinal cord Present Regionally restricted 5G , 5E Expression is ventral in the thoracic spinal cord.

Specimen 6A: postnatal day 7 (more )
Note: (B) High power view of the rectangle in (A). (C) Higher magnification of the cortical layers II/III.
Structure Level Pattern Image Note
TS28: brain Present Diffuse 6A
TS28: hippocampus Strong 6A
TS28: cortical layer II Present 6B , 6C , 6A
TS28: cortical layer III Present 6B , 6C , 6A
TS28: cortical layer I Present Single cells 6C , 6B , 6A

Specimen 6D: postnatal day 7 (more )
Note: Inset shows a magnified view of striatal neurons.
Structure Level Pattern Image Note
TS28: caudate-putamen Strong 6D

Specimen 7A: postnatal adult (more )
Structure Level Pattern Image Note
TS28: amygdala Present 7A
TS28: bed nucleus of stria terminalis Present 7A
TS28: caudate-putamen Present 7A
TS28: cingulate cortex Present 7A
TS28: entorhinal cortex Present 7A
TS28: neocortex Present 7A
TS28: piriform cortex Present 7A
TS28: telencephalon septum Present 7A

Specimen 7B: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer II Present 7B
TS28: cortical layer III Present 7B
TS28: cortical layer IV Present 7B
TS28: cortical layer V Present 7B
TS28: cortical layer VI Present 7B
TS28: cerebral hemisphere white matter Absent 7B
TS28: corpus callosum Absent 7B
TS28: cortical layer I Absent 7B

Specimen 7C: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer II Present 7C
TS28: cortical layer I Absent 7C

Specimen 7D: postnatal adult (more )
Structure Level Pattern Image Note
TS28: amygdaloid nucleus Present 7D
TS28: hippocampus Present 7D
TS28: epithalamus Absent 7D
TS28: globus pallidus Absent 7D
TS28: hypothalamus Absent 7D
TS28: thalamus Absent 7D

Specimen 7E: postnatal adult (more )
Structure Level Pattern Image Note
TS28: caudate-putamen Present 7E
TS28: globus pallidus Absent 7E

Specimen 7F: postnatal adult (more )
Structure Level Pattern Image Note
TS28: CA1 pyramidal cell layer Present 7F
TS28: CA2 pyramidal cell layer Present 7F
TS28: CA3 pyramidal cell layer Present 7F
TS28: dentate gyrus granule cell layer Present 7F

Specimen 7G: postnatal adult (more )
Structure Level Pattern Image Note
TS28: CA1 pyramidal cell layer Present 7G
TS28: CA2 pyramidal cell layer Present 7G
TS28: CA3 pyramidal cell layer Present 7G

Specimen 7H: postnatal adult (more )
Structure Level Pattern Image Note
TS28: anterior commissure Absent 7H
TS28: corpus callosum Absent 7H
TS28: posterior commissure Absent 7H

Specimen 7I: postnatal adult (more )
Structure Level Pattern Image Note
TS28: midbrain Absent 7I

Specimen 7J: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellum internal granule cell layer Trace 7J Absent in the rest of the cerebellum.
TS28: medulla oblongata Absent 7J

Specimen 8A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: dorsal root ganglion Present 8A
TS20: spinal cord Absent 8A

Specimen 8B,E: embryonic day 13.5 (more )
Note: (E) Higher magnification of the boxed area in (B).
Structure Level Pattern Image Note
TS21: spinal cord Present Regionally restricted 8E , 8B Expression is in a subset of neuroepithelial cells in the ventral and caudal parts of the spinal cord adjacent to the floor plate.

Specimen 8C: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: spinal cord Present Regionally restricted 8C Expression is in a subset of neuroepithelial cells in the ventral and caudal parts of the spinal cord adjacent to the floor plate.

Specimen 8D: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: spinal cord gray matter Present Scattered 8D
TS24: spinal cord white matter Present Scattered 8D
TS24: dorsal root ganglion Trace 8D

Specimen 8F: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: spinal cord gray matter Present Scattered 8F
TS24: spinal cord white matter Present Scattered 8F

Specimen 9A: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebellum layer Present Regionally restricted 9A Expression is in the external granule layer.

Specimen 9B: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebellum layer Present Regionally restricted 9B Expression is in the external granule layer.

Specimen 9C: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cerebellum external granule cell layer Present 9C

Specimen 9D: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cerebellum external granule cell layer Present 9D

Specimen 9E: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: cerebellum external granule cell layer Present 9E

Specimen 9F: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: cerebellum external granule cell layer Present 9F
TS28: cerebellum molecular layer Present Regionally restricted 9F Expression is in small cells residing in the vicinity of Purkinje cells at the outermost region of the molecular layer.
TS28: cerebellum Purkinje cell layer Absent 9F

Specimen 10A: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: olfactory epithelium Present Regionally restricted 10A Expression is in the basal compartment.

Specimen 10B,C: embryonic day 16.5 (more )
Note: (C) High magnification of the boxed area in (B).
Structure Level Pattern Image Note
TS24: main olfactory bulb Present Regionally restricted 10C , 10B Expression is in the superficial layer of the olfactory bulb with little or no expression in the olfactory subventricular zone.
TS24: rostral migratory stream Ambiguous 10B , 10C Little or no expression in rostral migratory stream.

Specimen 10D: postnatal day 7 (more )
Note: (E) High magnification of the boxed area in (D).
Structure Level Pattern Image Note
TS28: main olfactory bulb glomerular layer Present Regionally restricted 10D , 10E Expression is in periglomerular cells.

Specimen not shown: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: future spinal cord Absent

Specimen not shown adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: anterior olfactory nucleus Present
TS28: entorhinal cortex Present


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
04/23/2024
MGI 6.23
The Jackson Laboratory