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Gene Expression Data
Assay Details
Assay
Reference: J:31181 Davis CA, et al., Examining pattern formation in mouse, chicken and frog embryos with an En-specific antiserum. Development. 1991 Feb;111(2):287-98
Assay type: Immunohistochemistry
MGI Accession ID: MGI:5775211
Gene symbol: En1
Gene name: engrailed 1
Antibody: alpha Enhb-1
Detection system: Secondary antibody coupled to horseradish peroxidase
Assay notes: Antibody used also recognizes a related gene: En2 (MGI:95390) has also been annotated.
Results
Specimen 2A: embryonic day 8.0 (more )
Note: 1 somite stage
Structure Level Pattern Image Note
TS12: neural plate Weak Regionally restricted 2A Expression first observed in open neural plate as first somites were condensing. Expression rostral to pre-otic sulcus. Weak expression, relatively uniform in two patches on either side of midline. Border of patches somewhat diffuse. Expression in occasional cells not adjacent to patches. No expression in medial and lateral neuroepithelium.

Specimen 2B: embryonic day 8.0 (more )
Note: 3 somite stage
Structure Level Pattern Image Note
TS12: neural plate Strong Regionally restricted 2B Intense expression in every cell in region. Area of expression increased almost threefold. Rapid expansion of band due largely to rostral extension of anterior edge relative to pre-otic sulcus. No expression in medial and lateral neuroepithelium.

Specimen 3A: embryonic day 8.0 (more )
Note: 2-3 somite stage
Structure Level Pattern Image Note
TS12: neural plate Present Regionally restricted 3A Authors state expression is restricted to the neuroepithelium until the first 4 somites developed. No expression in medial and lateral neuroepithelium.

Specimen 3B: embryonic day 8.0 (more )
Note: 4 somite stage
Structure Level Pattern Image Note
TS12: neural plate Present Regionally restricted 3B Authors state expression is restricted to the neuroepithelium until the first 4 somites developed. No expression in medial and lateral neuroepithelium.
TS12: embryo mesenchyme Present Single cells 3B Expression in a small number of cells dispersed in the mesenchyme adjacent to the edge of the neural plate.

Specimen 12 somite stage not shown: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: migrating neural crest Present Regionally restricted Expression in mesenchyme cells, possibly neural crest cells, forming a stream extending ventrally and caudally from the dorsal midline of the neural tube at the caudal edge of expressing neuroepithelium.

Specimen 3D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube Present Regionally restricted 3D Following neural tube closure, expression extends to include ventral and dorsal midlines.
TS15: midbrain-hindbrain junction Present 3D Expression in entire circumference of neural tube at midbrain-midbrain junction.
TS15: 1st branchial arch Present Regionally restricted 3D Expression in a core of cells in the mandibular arches.

Specimen 3F: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: pituitary gland Present Regionally restricted 3F Expression in cells surrounding the ventral portion of the pituitary.

Specimen 4A: embryonic day 8.0 (more )
Note: 5 somite stage
Structure Level Pattern Image Note
TS12: future midbrain Present Regionally restricted 4A Expression in most of the broad plate extending from just rostral to the pre-otic sulcus to the prosencephalon-mesencephalon junction.
TS12: future prosencephalon Present Regionally restricted 4A Some expression also extending rostrally across the prosencephalon-mesencephalon junction.

Specimen 4B: embryonic day 8.0 (more )
Note: 7 somite stage
Structure Level Pattern Image Note
TS12: future midbrain Present Regionally restricted 4B Caudal limit of expression remains anterior to the pre-otic sulcus; rostral limit shifts into the mesencephalon.

Specimen 4C: embryonic day 8.5 (more )
Note: 9 somite stage
Structure Level Pattern Image Note
TS13: future midbrain Present Regionally restricted 4C Expression spans mesencephalic neuromere 2.
TS13: rhombomere Present 4C Forming rhombomeres visible caudal to the region of expression.

Specimen 9.5 days not shown: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: midbrain-hindbrain junction Present Band of expression spanning constriction at mesencephalon-metencephalon boundary.
TS15: future midbrain Present Regionally restricted Rostral boundary of expression in the mesencephalon.
TS15: rhombomere 1 Present Caudal border anterior to the rhombomere 1-rhombomere 2 border.

Specimen 5A: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: midbrain-hindbrain junction Present 5A Expression straddled constriction at cephalic flexure dividing mesencephalon and metencephalon.
TS16: future hindbrain Present Regionally restricted 5A Expression includes a large portion of mesencephalon and most of metencephalon.
TS16: future midbrain Present Regionally restricted 5A Expression includes a large portion of mesencephalon and most of metencephalon.
TS16: rhombomere 1 Present Regionally restricted 5A Expression ending rostral to boundary between rhombomeres 1 and 2.
TS16: future spinal cord Present Regionally restricted 5A Expression extends from junction of rhombomeres 1 and 2 in the hindbrain to the caudal spinal cord.
TS16: dermatome Present Regionally restricted 5A Expression in a stripe covering the lateral middle third of the dermatome portion of somites.

Specimen 5B: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: future hindbrain Present Regionally restricted 5B Expression extending from junction of rhombomeres 1 and 2 in the hindbrain to the caudal spinal cord.
TS16: future spinal cord Present Regionally restricted 5B Expression extending from junction of rhombomeres 1 and 2 in the hindbrain to the caudal spinal cord.
TS16: dermatome Present Regionally restricted 5B Expression in a stripe covering the lateral middle third of the dermatome portion of somites. Expression at approximately the same dorsal-ventral level as expressing neurons in the spinal cord.

Specimen 6A: embryonic day 9.5 (more )
Note: Section at level of forelimb.
Structure Level Pattern Image Note
TS15: future spinal cord Present 6A
TS15: dermatome Present Regionally restricted 6A Expression in a stripe covering the lateral middle third of the dermatome portion of somites. Expression at approximately the same dorsal-ventral level as expressing neurons in the spinal cord.
TS15: forelimb bud Present Regionally restricted 6A Expression first evident as a thin crescent of expressing cells along the ventral edge of the developing limb bud, preceding the formation of the apical ectodermal ridge.

Specimen 17 somite stage not shown: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: neural tube Present Regionally restricted Authors state that expression was first seen at approximately the 17 somite stage within area bounded anteriorly by otic vesicle and posteriorly by the first somite.

Specimen 18 somite stage: embryonic day 9.0 (more )
Note: Expression pattern shown schematically in Figure 6B.
Structure Level Pattern Image Note
TS14: future spinal cord Present Expression proceeded uniformly down the length of the spinal cord.
TS14: future hindbrain Present Regionally restricted Rostral progression halted just behind the otic vesicle at the junction of rhombomeres 6 and 7.

Specimen 20 somite stage: embryonic day 9.0 (more )
Note: Expression pattern shown schematically in Figure 6B.
Structure Level Pattern Image Note
TS14: future spinal cord Present
TS14: rhombomere 3 Present Expression appeared in rhombomeres 3 and 4.
TS14: rhombomere 4 Present Expression appeared in rhombomeres 3 and 4.

Specimen 27 somite stage: embryonic day 9.5 (more )
Note: Expression pattern shown schematically in Figure 6B.
Structure Level Pattern Image Note
TS15: future spinal cord Present
TS15: future hindbrain Present Regionally restricted Final anterior limit of expression was defined at the junction between rhombomeres 1 and 2.

Specimen 10 days not shown: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: limb bud Present Regionally restricted Expression in entire ventral surface of limb bud.
TS16: apical ectodermal ridge Present Regionally restricted Expression in apical ridge always included the ventral portion and occasionally extended to include the dorsal ridge.
TS16: surface ectoderm Present Regionally restricted Expression in ventral trunk epidermis adjacent to limb bud.

Specimen 6D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: future spinal cord Present 6D
TS17: dermatome Present Regionally restricted 6D Expression in a stripe covering the lateral middle third of the dermatome portion of somites. Expression at approximately the same dorsal-ventral level as expressing neurons in the spinal cord.

Specimen 6E: embryonic day 15.5 (more )
Note: Transverse section through spinal cord just caudal to hindbrain-spinal cord junction.
Structure Level Pattern Image Note
TS23: spinal cord Present Regionally restricted 6E Expression in cells widely spread in the ventral portion of the spinal cord.

Specimen 6F: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: forelimb bud ectoderm Present Regionally restricted 6F Expression faded uniformly in the ventral ectoderm.
TS19: handplate ectoderm Present Regionally restricted 6F Expression still strong in a stripe approximately 6 cells wide traversing the midline of the tips of the developing digits.


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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory