Gene Expression Data
Assay Details
Assay
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Reference:
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J:31181
Davis CA, et al., Examining pattern formation in mouse, chicken and frog embryos with an En-specific antiserum. Development. 1991 Feb;111(2):287-98
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Assay type:
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Immunohistochemistry
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MGI Accession ID:
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MGI:5775211
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Gene symbol:
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En1
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Gene name:
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engrailed 1
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Antibody:
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alpha Enhb-1
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Detection system:
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Secondary antibody coupled to horseradish peroxidase
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Assay notes:
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Antibody used also recognizes a related gene: En2 (MGI:95390) has also been annotated.
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Results
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Specimen
2A:
embryonic day 8.0
(more )
Note: 1 somite stage
Specimen
2A:
(close )
Genetic Background:
|
Not Specified
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Age:
|
embryonic day 8.0
|
Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
|
Dent's Fixative
|
Note:
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1 somite stage
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: neural plate |
Weak |
Regionally restricted |
2A
|
Expression first observed in open neural plate as first somites were condensing. Expression rostral to pre-otic sulcus. Weak expression, relatively uniform in two patches on either side of midline. Border of patches somewhat diffuse. Expression in occasional cells not adjacent to patches. No expression in medial and lateral neuroepithelium.
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Specimen
2B:
embryonic day 8.0
(more )
Note: 3 somite stage
Specimen
2B:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 8.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
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Fixation:
|
Dent's Fixative
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Note:
|
3 somite stage
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: neural plate |
Strong |
Regionally restricted |
2B
|
Intense expression in every cell in region. Area of expression increased almost threefold. Rapid expansion of band due largely to rostral extension of anterior edge relative to pre-otic sulcus. No expression in medial and lateral neuroepithelium.
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Specimen
3A:
embryonic day 8.0
(more )
Note: 2-3 somite stage
Specimen
3A:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 8.0
|
Sex:
|
Not Specified
|
Type:
|
section
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Fixation:
|
Dent's Fixative
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Embedding:
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Paraffin
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Note:
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2-3 somite stage
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Structure |
Level |
Pattern |
Image |
Note |
TS12: neural plate |
Present |
Regionally restricted |
3A
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Authors state expression is restricted to the neuroepithelium until the first 4 somites developed. No expression in medial and lateral neuroepithelium.
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Specimen
3B:
embryonic day 8.0
(more )
Note: 4 somite stage
Specimen
3B:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 8.0
|
Sex:
|
Not Specified
|
Type:
|
section
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Fixation:
|
Dent's Fixative
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Embedding:
|
Paraffin
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Note:
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4 somite stage
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: neural plate |
Present |
Regionally restricted |
3B
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Authors state expression is restricted to the neuroepithelium until the first 4 somites developed. No expression in medial and lateral neuroepithelium.
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TS12: embryo mesenchyme |
Present |
Single cells |
3B
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Expression in a small number of cells dispersed in the mesenchyme adjacent to the edge of the neural plate.
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Specimen
12 somite stage not shown:
embryonic day 8.5
(more )
Specimen
12 somite stage not shown:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
Not Specified
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Fixation:
|
Dent's Fixative
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: migrating neural crest |
Present |
Regionally restricted |
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Expression in mesenchyme cells, possibly neural crest cells, forming a stream extending ventrally and caudally from the dorsal midline of the neural tube at the caudal edge of expressing neuroepithelium.
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Specimen
3D:
embryonic day 9.5
(more )
Specimen
3D:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
section
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Fixation:
|
Dent's Fixative
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Embedding:
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Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: neural tube |
Present |
Regionally restricted |
3D
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Following neural tube closure, expression extends to include ventral and dorsal midlines.
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TS15: midbrain-hindbrain junction |
Present |
|
3D
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Expression in entire circumference of neural tube at midbrain-midbrain junction.
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TS15: 1st branchial arch |
Present |
Regionally restricted |
3D
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Expression in a core of cells in the mandibular arches.
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Specimen
3F:
embryonic day 15.5
(more )
Specimen
3F:
(close )
Genetic Background:
|
Not Specified
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Age:
|
embryonic day 15.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
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Dent's Fixative
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS23: pituitary gland |
Present |
Regionally restricted |
3F
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Expression in cells surrounding the ventral portion of the pituitary.
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Specimen
4A:
embryonic day 8.0
(more )
Note: 5 somite stage
Specimen
4A:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 8.0
|
Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
|
Dent's Fixative
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Note:
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5 somite stage
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Structure |
Level |
Pattern |
Image |
Note |
TS12: future midbrain |
Present |
Regionally restricted |
4A
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Expression in most of the broad plate extending from just rostral to the pre-otic sulcus to the prosencephalon-mesencephalon junction.
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TS12: future prosencephalon |
Present |
Regionally restricted |
4A
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Some expression also extending rostrally across the prosencephalon-mesencephalon junction.
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Specimen
4B:
embryonic day 8.0
(more )
Note: 7 somite stage
Specimen
4B:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 8.0
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Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
|
Dent's Fixative
|
Note:
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7 somite stage
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Structure |
Level |
Pattern |
Image |
Note |
TS12: future midbrain |
Present |
Regionally restricted |
4B
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Caudal limit of expression remains anterior to the pre-otic sulcus; rostral limit shifts into the mesencephalon.
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Specimen
4C:
embryonic day 8.5
(more )
Note: 9 somite stage
Specimen
4C:
(close )
Genetic Background:
|
Not Specified
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Age:
|
embryonic day 8.5
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Sex:
|
Not Specified
|
Type:
|
whole mount
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Fixation:
|
Dent's Fixative
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Note:
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9 somite stage
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Structure |
Level |
Pattern |
Image |
Note |
TS13: future midbrain |
Present |
Regionally restricted |
4C
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Expression spans mesencephalic neuromere 2.
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TS13: rhombomere |
Present |
|
4C
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Forming rhombomeres visible caudal to the region of expression.
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Specimen
9.5 days not shown:
embryonic day 9.5
(more )
Specimen
9.5 days not shown:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
Not Specified
|
Fixation:
|
Dent's Fixative
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Specimen
5A:
embryonic day 10.0
(more )
Specimen
5A:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
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Fixation:
|
Dent's Fixative
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: midbrain-hindbrain junction |
Present |
|
5A
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Expression straddled constriction at cephalic flexure dividing mesencephalon and metencephalon.
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TS16: future hindbrain |
Present |
Regionally restricted |
5A
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Expression includes a large portion of mesencephalon and most of metencephalon.
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TS16: future midbrain |
Present |
Regionally restricted |
5A
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Expression includes a large portion of mesencephalon and most of metencephalon.
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TS16: rhombomere 1 |
Present |
Regionally restricted |
5A
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Expression ending rostral to boundary between rhombomeres 1 and 2.
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TS16: future spinal cord |
Present |
Regionally restricted |
5A
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Expression extends from junction of rhombomeres 1 and 2 in the hindbrain to the caudal spinal cord.
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TS16: dermatome |
Present |
Regionally restricted |
5A
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Expression in a stripe covering the lateral middle third of the dermatome portion of somites.
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Specimen
5B:
embryonic day 10.0
(more )
Specimen
5B:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
Dent's Fixative
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: future hindbrain |
Present |
Regionally restricted |
5B
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Expression extending from junction of rhombomeres 1 and 2 in the hindbrain to the caudal spinal cord.
|
TS16: future spinal cord |
Present |
Regionally restricted |
5B
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Expression extending from junction of rhombomeres 1 and 2 in the hindbrain to the caudal spinal cord.
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TS16: dermatome |
Present |
Regionally restricted |
5B
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Expression in a stripe covering the lateral middle third of the dermatome portion of somites. Expression at approximately the same dorsal-ventral level as expressing neurons in the spinal cord.
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Specimen
6A:
embryonic day 9.5
(more )
Note: Section at level of forelimb.
Specimen
6A:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
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Type:
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section
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Fixation:
|
Dent's Fixative
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Embedding:
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Paraffin
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Note:
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Section at level of forelimb.
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: future spinal cord |
Present |
|
6A
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TS15: dermatome |
Present |
Regionally restricted |
6A
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Expression in a stripe covering the lateral middle third of the dermatome portion of somites. Expression at approximately the same dorsal-ventral level as expressing neurons in the spinal cord.
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TS15: forelimb bud |
Present |
Regionally restricted |
6A
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Expression first evident as a thin crescent of expressing cells along the ventral edge of the developing limb bud, preceding the formation of the apical ectodermal ridge.
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Specimen
17 somite stage not shown:
embryonic day 9.0
(more )
Specimen
17 somite stage not shown:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
Not Specified
|
Fixation:
|
Dent's Fixative
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: neural tube |
Present |
Regionally restricted |
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Authors state that expression was first seen at approximately the 17 somite stage within area bounded anteriorly by otic vesicle and posteriorly by the first somite.
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Specimen
18 somite stage:
embryonic day 9.0
(more )
Note: Expression pattern shown schematically in Figure 6B.
Specimen
18 somite stage:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
Not Specified
|
Fixation:
|
Dent's Fixative
|
Note:
|
Expression pattern shown schematically in Figure 6B.
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: future spinal cord |
Present |
|
|
Expression proceeded uniformly down the length of the spinal cord.
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TS14: future hindbrain |
Present |
Regionally restricted |
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Rostral progression halted just behind the otic vesicle at the junction of rhombomeres 6 and 7.
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Specimen
20 somite stage:
embryonic day 9.0
(more )
Note: Expression pattern shown schematically in Figure 6B.
Specimen
20 somite stage:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
Not Specified
|
Fixation:
|
Dent's Fixative
|
Note:
|
Expression pattern shown schematically in Figure 6B.
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Specimen
27 somite stage:
embryonic day 9.5
(more )
Note: Expression pattern shown schematically in Figure 6B.
Specimen
27 somite stage:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
Not Specified
|
Fixation:
|
Dent's Fixative
|
Note:
|
Expression pattern shown schematically in Figure 6B.
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Specimen
10 days not shown:
embryonic day 10.0
(more )
Specimen
10 days not shown:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
Not Specified
|
Fixation:
|
Dent's Fixative
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: limb bud |
Present |
Regionally restricted |
|
Expression in entire ventral surface of limb bud.
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TS16: apical ectodermal ridge |
Present |
Regionally restricted |
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Expression in apical ridge always included the ventral portion and occasionally extended to include the dorsal ridge.
|
TS16: surface ectoderm |
Present |
Regionally restricted |
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Expression in ventral trunk epidermis adjacent to limb bud.
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Specimen
6D:
embryonic day 10.5
(more )
Specimen
6D:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Dent's Fixative
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: future spinal cord |
Present |
|
6D
|
|
TS17: dermatome |
Present |
Regionally restricted |
6D
|
Expression in a stripe covering the lateral middle third of the dermatome portion of somites. Expression at approximately the same dorsal-ventral level as expressing neurons in the spinal cord.
|
Specimen
6E:
embryonic day 15.5
(more )
Note: Transverse section through spinal cord just caudal to hindbrain-spinal cord junction.
Specimen
6E:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 15.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Dent's Fixative
|
Embedding:
|
Paraffin
|
Note:
|
Transverse section through spinal cord just caudal to hindbrain-spinal cord junction.
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: spinal cord |
Present |
Regionally restricted |
6E
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Expression in cells widely spread in the ventral portion of the spinal cord.
|
Specimen
6F:
embryonic day 11.5
(more )
Specimen
6F:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
Dent's Fixative
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: forelimb bud ectoderm |
Present |
Regionally restricted |
6F
|
Expression faded uniformly in the ventral ectoderm.
|
TS19: handplate ectoderm |
Present |
Regionally restricted |
6F
|
Expression still strong in a stripe approximately 6 cells wide traversing the midline of the tips of the developing digits.
|
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