Gene Expression Data
Assay Details
Assay
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Reference:
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J:56240
Lichanska AM, et al., Differentiation of the mononuclear phagocyte system during mouse embryogenesis: the role of transcription factor PU.1. Blood. 1999 Jul 1;94(1):127-38
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5762978
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Gene symbol:
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Csf1r
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Gene name:
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colony stimulating factor 1 receptor
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Probe:
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c-fms probe
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
1A:
embryonic day 10.5
(more )
Specimen
1A:
(close )
Genetic Background:
|
either: CD-1 or Quackenbush Swiss
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Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
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4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: branchial arch |
Present |
|
1A
|
|
TS17: head |
Present |
|
1A
|
|
TS17: embryo |
Present |
Spotted |
1A
|
Expressed in a very extensive speckled pattern throughout the embryo. Labeled cells are particularly concentrated in the head, around the branchial arches, and along the dorsal midline.
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Specimen
1B:
embryonic day 11.0
(more )
Specimen
1B:
(close )
Genetic Background:
|
either: CD-1 or Quackenbush Swiss
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Age:
|
embryonic day 11.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS18: liver |
Present |
|
1B
|
|
TS18: embryo |
Present |
Spotted |
1B
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Expressed in a fine speckled pattern of labeled cells throughout the embryo.
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Specimen
1C:
embryonic day 12.5
(more )
Specimen
1C:
(close )
Genetic Background:
|
either: CD-1 or Quackenbush Swiss
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Age:
|
embryonic day 12.5
|
Sex:
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Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
1D:
embryonic day 12.5
(more )
Specimen
1D:
(close )
Genetic Background:
|
either: CD-1 or Quackenbush Swiss
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
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Fixation:
|
4% Paraformaldehyde
|
Embedding:
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Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: digit epithelium |
Present |
Regionally restricted |
1D
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Positive cells leaved the marginal sinus and infiltrated the mesenchyme.
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TS20: digit mesenchyme |
Present |
Regionally restricted |
1D
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Positive cells leaved the marginal sinus and infiltrated the mesenchyme.
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Specimen
1E:
embryonic day 12.5
(more )
Note: To improve the penetration, some embryos were cut midsagitally before hybridization.
Specimen
1E:
(close )
Genetic Background:
|
either: CD-1 or Quackenbush Swiss
|
Age:
|
embryonic day 12.5
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Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
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To improve the penetration, some embryos were cut midsagitally before hybridization.
|
Specimen
1F:
embryonic day 11.5
(more )
Specimen
1F:
(close )
Genetic Background:
|
either: CD-1 or Quackenbush Swiss
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Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
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Fixation:
|
4% Paraformaldehyde
|
Embedding:
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Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: body wall |
Present |
Regionally restricted |
1F
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Expressed along the dorsal midline, closely associated with the vascular spaces adjacent to the neural tube, within the premuscle mass and the epidermis.
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Specimen
1G:
embryonic day 11.5
(more )
Specimen
1G:
(close )
Genetic Background:
|
either: CD-1 or Quackenbush Swiss
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Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: brain |
Present |
|
1G
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Many labeled cells have engulfed dying cells and contain pyknotic nuclei.
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Specimen
1H:
embryonic day 11.5
(more )
Specimen
1H:
(close )
Genetic Background:
|
either: CD-1 or Quackenbush Swiss
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: liver |
Present |
|
1H
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Expressed in cells showing stellate morphology and intimate association with smaller hematopoietic cells.
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Specimen
7A:
embryonic day 11.5
(more )
Specimen
7A:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: embryo |
Present |
Spotted |
7A
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Expressed in a speckled pattern throughout the embryo.
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TS19: brain |
Present |
Spotted |
7A
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Expressed in a speckled pattern.
|
TS19: branchial arch |
Present |
Spotted |
7A
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Expressed in a speckled pattern.
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TS19: heart |
Present |
Spotted |
7A
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Expressed in a speckled pattern.
|
TS19: limb |
Present |
Spotted |
7A
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Expressed in a speckled pattern.
|
TS19: liver |
Present |
Spotted |
7A
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Expressed in a speckled pattern.
|
TS19: body wall |
Present |
Regionally restricted |
7A
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Expressed along the dorsal midline and under the skin.
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Specimen
7B:
(close )
Genetic Background:
|
involves: 129S2/SvPas
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Mutant Allele(s):
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Spi1tm1Ram/Spi1tm1Ram
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Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: embryo |
Present |
Spotted |
7B
|
Expressed in a speckled pattern throughout the embryo, same as in the wild-type.
|
TS19: brain |
Present |
Spotted |
7B
|
Expressed in a speckled pattern, same as in the wild-type.
|
TS19: branchial arch |
Present |
Spotted |
7B
|
Expressed in a speckled pattern, same as in the wild-type.
|
TS19: heart |
Present |
Spotted |
7B
|
Expressed in a speckled pattern, same as in the wild-type.
|
TS19: limb |
Present |
Spotted |
7B
|
Expressed in a speckled pattern, same as in the wild-type.
|
TS19: liver |
Present |
Spotted |
7B
|
Expressed in a speckled pattern, same as in the wild-type.
|
TS19: body wall |
Present |
Regionally restricted |
7B
|
Expressed along the dorsal midline and under the skin, same as in the wild-type.
|
Specimen
7C:
(close )
Genetic Background:
|
involves: 129S2/SvPas
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Mutant Allele(s):
|
Spi1tm1Ram/Spi1tm1Ram
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Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: liver |
Present |
|
7C
|
|
Specimen
7D:
(close )
Genetic Background:
|
involves: 129S2/SvPas
|
Mutant Allele(s):
|
Spi1tm1Ram/Spi1tm1Ram
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: limb bud |
Present |
|
7D
|
Similar morphology and location to those in wild-type.
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Specimen
not shown:
embryonic day 9.5
(more )
Specimen
not shown:
(close )
Genetic Background:
|
either: CD-1 or Quackenbush Swiss
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: yolk sac |
Present |
Single cells |
|
Expressed as isolated individual cells rather than clusters associated with blood islands.
|
Specimen
not shown:
embryonic day 10.0
(more )
Specimen
not shown:
(close )
Genetic Background:
|
either: CD-1 or Quackenbush Swiss
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: heart |
Present |
Regionally restricted |
|
Expressed a band overlying the developing heart.
|
Specimen
not shown:
embryonic day 11.5
(more )
Specimen
not shown:
(close )
Genetic Background:
|
either: CD-1 or Quackenbush Swiss
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: eye |
Present |
|
|
|
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