Gene Expression Data
Assay Details
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Assay
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Reference:
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J:224530
Dietrich JE, et al., Venus trap in the mouse embryo reveals distinct molecular dynamics underlying specification of first embryonic lineages. EMBO Rep. 2015 Aug;16(8):1005-21
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Assay type:
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In situ reporter (knock in)
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MGI Accession ID:
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MGI:5697022
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Gene symbol:
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Cers6
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Gene name:
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ceramide synthase 6
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Reporter:
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YFP
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Direct Detection
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Results
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Specimen
2A E1.5:
(close  )
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Genetic Background:
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involves: C3H * C57BL/6
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Mutant Allele(s):
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Cers6Gt(fVET12A)Hiir/Cers6+
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Age:
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embryonic day 1.5
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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2-4 cell stage
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Specimen
2A E1.5:
(close )
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Genetic Background:
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involves: C3H * C57BL/6
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Mutant Allele(s):
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Cers6Gt(fVET12A)Hiir/Cers6+
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Age:
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embryonic day 1.5
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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2-4 cell stage
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Specimen
2A E2.5:
embryonic day 2.5; Cers6Gt(fVET12A)Hiir/Cers6 +
(more  )
Note: 8-16 cell stage morula
Specimen
2A E2.5:
(close )
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Genetic Background:
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involves: C3H * C57BL/6
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Mutant Allele(s):
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Cers6Gt(fVET12A)Hiir/Cers6+
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Age:
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embryonic day 2.5
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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8-16 cell stage morula
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| Structure |
Level |
Pattern |
Image |
Note |
| TS3: 8-cell stage embryo |
Present |
Non-Uniform |
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Expression is seen in a subset of blastomeres but is not specific to any particular lineage.
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| TS3: compacted morula |
Present |
Non-Uniform |
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Expression is seen in a subset of blastomeres but is not specific to any particular lineage.
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Specimen
2A E3.5:
(close )
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Genetic Background:
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involves: C3H * C57BL/6
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Mutant Allele(s):
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Cers6Gt(fVET12A)Hiir/Cers6+
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Age:
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embryonic day 3.5
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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blastocyst stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS4: blastocyst |
Present |
Non-Uniform |
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Expression is seen in a subset of blastomeres but is not specific to any particular lineage.
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Specimen
2A E4.5:
(close )
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Genetic Background:
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involves: C3H * C57BL/6
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Mutant Allele(s):
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Cers6Gt(fVET12A)Hiir/Cers6+
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Age:
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embryonic day 4.5
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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blastocyst stage
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Specimen
EV2G E1.5:
(close )
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Genetic Background:
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involves: C3H * C57BL/6
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Mutant Allele(s):
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Cers6Gt(fVET12A)Hiir/Cers6+
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Age:
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embryonic day 1.5
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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2-4 cell stage
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Specimen
EV2G E2.5:
embryonic day 2.5; Cers6Gt(fVET12A)Hiir/Cers6 +
(more )
Note: 8-16 cell stage morula
Specimen
EV2G E2.5:
(close )
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Genetic Background:
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involves: C3H * C57BL/6
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Mutant Allele(s):
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Cers6Gt(fVET12A)Hiir/Cers6+
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Age:
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embryonic day 2.5
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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8-16 cell stage morula
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| Structure |
Level |
Pattern |
Image |
Note |
| TS3: compacted morula |
Present |
Non-Uniform |
EV2G E2.5
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Expression is seen in a subset of blastomeres but is not specific to any particular lineage.
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Specimen
EV2G E3.5:
(close )
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Genetic Background:
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involves: C3H * C57BL/6
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Mutant Allele(s):
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Cers6Gt(fVET12A)Hiir/Cers6+
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Age:
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embryonic day 3.5
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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blastocyst stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS4: blastocyst |
Present |
Non-Uniform |
EV2G E3.5
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Expression is seen in a subset of blastomeres but is not specific to any particular lineage.
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Specimen
EV2G E4.5:
(close )
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Genetic Background:
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involves: C3H * C57BL/6
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Mutant Allele(s):
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Cers6Gt(fVET12A)Hiir/Cers6+
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Age:
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embryonic day 4.5
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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blastocyst stage
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Analysis Tools