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Gene Expression Data
Assay Details
Assay
Reference: J:64020 Christoffels VM, et al., Patterning the embryonic heart: identification of five mouse Iroquois homeobox genes in the developing heart. Dev Biol. 2000 Aug 15;224(2):263-74
Assay type: RNA in situ
MGI Accession ID: MGI:5661326
Gene symbol: Irx5
Gene name: Iroquois homeobox 5
Probe: Irx5 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen not shown: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: heart Present Regionally restricted Expression is present at the ventral side of the looping tubular heart at the level of the embryonic ventricle.

Specimen 2I: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: common atrial chamber endocardial lining Present 2I
TS15: primitive ventricle endocardial lining Present 2I

Specimen 2J: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: common atrial chamber endocardial lining Present 2J
TS15: primitive ventricle endocardial lining Present 2J
TS15: common atrial chamber cardiac muscle Absent 2J

Specimen 5C/F/I: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: left atrium endocardial lining Present 5C
TS19: right atrium endocardial lining Present 5I , 5C
TS19: right atrium cardiac muscle Absent 5I , 5C
TS19: left ventricle endocardial lining Present 5F , 5C
TS19: endocardial cushion Absent 5C , 5F No expression in the antrioventricular cushions.

Specimen 5H: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: left atrium endocardial lining Present 5H
TS19: left ventricle endocardial lining Present 5H
TS19: right atrium endocardial lining Present 5H
TS19: right ventricle endocardial lining Present 5H
TS19: outflow tract Absent 5H

Specimen 5J/L: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS20: left atrium endocardial lining Present 5J
TS20: left atrium cardiac muscle Absent 5J
TS20: endocardial lining Present Regionally restricted 5L , 5J Expression is found selectively in the endocardium lining the forming atrial and ventricular chambers. It is not found in the endocardium of the inflow tract, antrioventricular canal, inner curvature, and outflow tract.
TS20: atrioventricular canal Absent 5J
TS20: outflow tract Absent 5J
TS20: arch of aorta Absent 5J No expression in the endothelium.

Specimen not shown: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS20: interventricular septum cardiac muscle Weak Regionally restricted There is weak expression in cardiomyocytes at the top of the ventricular septum and the trabecules astride the septum.

Specimen not shown: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: atrium endocardial lining Present Expression is found selectively in the endocardium lining the forming atrial and ventricular chambers. It is not found in the endocardium of the inflow tract, antrioventricular canal, inner curvature, and outflow tract.
TS23: ventricle endocardial lining Present Expression is found selectively in the endocardium lining the forming atrial and ventricular chambers. It is not found in the endocardium of the inflow tract, antrioventricular canal, inner curvature, and outflow tract.

Specimen not shown: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: limb interdigital region mesenchyme Present


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/28/2024
MGI 6.13
The Jackson Laboratory