Gene Expression Data
Assay Details
Assay
|
Reference:
|
J:86966
Garcia-Frigola C, et al., Expression of the hyperpolarization-activated cyclic nucleotide-gated cation channel HCN4 during mouse heart development. Gene Expr Patterns. 2003 Dec;3(6):777-83
|
Assay type:
|
RNA in situ
|
MGI Accession ID:
|
MGI:5642317
|
Gene symbol:
|
Hcn4
|
Gene name:
|
hyperpolarization-activated, cyclic nucleotide-gated K+ 4
|
Probe:
|
Hcn4 cDNA
|
Probe preparation:
|
Antisense labelled with digoxigenin RNA
|
Visualized with:
|
Alkaline phosphatase
|
Assay notes:
|
Specimens were postfixed
in 4% paraformaldehyde, 0.2% glutaraldehyde.
|
|
Results
|
Specimen
1A:
embryonic day 7.5
(more )
Specimen
1A:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 7.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS11: heart |
Present |
Single cells |
1A
|
Expression is in the cardiac mesoderm.
|
Specimen
1B:
embryonic day 8.0
(more )
Note: 9 somites
Specimen
1B:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 8.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
9 somites
|
Specimen
1C:
embryonic day 8.0
(more )
Note: 9 somites
Specimen
1C:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 8.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
9 somites
|
Specimen
not shown E8:
embryonic day 8.0
(more )
Specimen
not shown E8:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 8.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: sinus venosus |
Present |
|
|
Expression is at the junction between the common cardinal veins and the sinus venosus.
|
TS12: venous system |
Present |
|
|
Expression is at the junction between the common cardinal veins and the sinus venosus.
|
Specimen
1D:
embryonic day 8.5
(more )
Specimen
1D:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
1E:
embryonic day 8.5
(more )
Specimen
1E:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
1F:
embryonic day 8.5
(more )
Specimen
1F:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
1G:
embryonic day 9.0
(more )
Specimen
1G:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
1H:
embryonic day 9.0
(more )
Specimen
1H:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
1I:
embryonic day 9.0
(more )
Specimen
1I:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
1J:
embryonic day 8.5
(more )
Specimen
1J:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
1K:
embryonic day 8.5
(more )
Specimen
1K:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
1L:
embryonic day 8.5
(more )
Specimen
1L:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
1M:
embryonic day 8.5
(more )
Specimen
1M:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
2A:
embryonic day 10.0
(more )
Specimen
2A:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
2B:
embryonic day 10.0
(more )
Specimen
2B:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
2C:
embryonic day 10.0
(more )
Specimen
2C:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
2D:
embryonic day 10.0
(more )
Specimen
2D:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
2E:
embryonic day 10.0
(more )
Specimen
2E:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
2F:
embryonic day 10.0
(more )
Specimen
2F:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
2G:
embryonic day 10.0
(more )
Specimen
2G:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: heart |
Present |
Regionally restricted |
2G
|
There is asymmetric expression in the right side, at the junction between the common cardinal vein and the sinus venosus.
|
TS16: septum transversum |
Present |
|
2G
|
|
Specimen
2H:
embryonic day 10.0
(more )
Specimen
2H:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: heart |
Present |
Regionally restricted |
2H
|
There is asymmetric expression in the right side, at the junction between the common cardinal vein and the sinus venosus.
|
TS16: septum transversum |
Present |
|
2H
|
|
Specimen
2I:
embryonic day 10.0
(more )
Specimen
2I:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
not shown E10:
embryonic day 10.0
(more )
Specimen
not shown E10:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
Not Specified
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
3A:
embryonic day 12.0
(more )
Specimen
3A:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 12.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: right atrium |
Present |
Regionally restricted |
3A
|
This is a frontal view of the whole heart where no expression is seen. The dorsal view (3B) of the heart shows asymmetrical expression in the dorsal wall of the right atrium.
|
Specimen
3B:
embryonic day 12.0
(more )
Specimen
3B:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 12.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
3C:
embryonic day 12.0
(more )
Specimen
3C:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 12.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
3D:
embryonic day 12.0
(more )
Specimen
3D:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 12.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: common cardinal vein |
Present |
Regionally restricted |
3D
|
Expression is in the junction between the right common cardinal vein and the right atrial appendage. Some expression is in the left common cardinal vein.
|
TS20: right atrium |
Present |
Regionally restricted |
3D
|
Expression is in the junction between the right common cardinal vein and the right atrial appendage. Some expression is in the left common cardinal vein.
|
TS20: sinus venosus left horn |
Weak |
|
3D
|
|
Specimen
3E:
embryonic day 12.0
(more )
Specimen
3E:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 12.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
4A:
postnatal day 4
(more )
Specimen
4A:
(close )
Genetic Background:
|
CD-1
|
Age:
|
postnatal day 4
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: heart |
Strong |
Regionally restricted |
4A
|
Expression is surrounding the portion of the superior vena cava in close proximity to the right atrial appendage.
|
TS28: sinoatrial node |
Strong |
|
4A
|
|
Specimen
4B:
postnatal day 4
(more )
Specimen
4B:
(close )
Genetic Background:
|
CD-1
|
Age:
|
postnatal day 4
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: right atrium |
Strong |
Regionally restricted |
4B
|
Expressing cells occupy the junction between the superior vena cava and the right atrial appendage.
|
TS28: sinoatrial node |
Strong |
Regionally restricted |
4B
|
Expressing cells occupy the junction between the superior vena cava and the right atrial appendage.
|
Specimen
4C:
postnatal day 4
(more )
Specimen
4C:
(close )
Genetic Background:
|
CD-1
|
Age:
|
postnatal day 4
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
4D:
postnatal day 4
(more )
Specimen
4D:
(close )
Genetic Background:
|
CD-1
|
Age:
|
postnatal day 4
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: right atrium |
Strong |
Regionally restricted |
4D
|
Expression is at the in the junction between the superior vena cava and the right atrial appendage.
|
TS28: vena cava |
Strong |
Regionally restricted |
4D
|
Expression is at the in the junction between the superior vena cava and the right atrial appendage.
|
TS28: sinoatrial node |
Strong |
|
4D
|
|
Specimen
5A:
postnatal adult
(more )
Specimen
5A:
(close )
Genetic Background:
|
CD-1
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
5B:
postnatal adult
(more )
Specimen
5B:
(close )
Genetic Background:
|
CD-1
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: right atrium |
Present |
Regionally restricted |
5B
|
Expressing cells are surrounding the orifice of the superior vena cava, and extending caudally, following the crista terminalis as a border.
|
TS28: sinoatrial node |
Present |
|
5B
|
|
Specimen
5C:
postnatal adult
(more )
Specimen
5C:
(close )
Genetic Background:
|
CD-1
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: right atrium |
Present |
Regionally restricted |
5C
|
Expressing cells are located surrounding the superior vena cava at the junction with the right atrial appendage.
|
TS28: sinoatrial node |
Present |
|
5C
|
|
|