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Gene Expression Data
Assay Details
Assay
Reference: J:86966 Garcia-Frigola C, et al., Expression of the hyperpolarization-activated cyclic nucleotide-gated cation channel HCN4 during mouse heart development. Gene Expr Patterns. 2003 Dec;3(6):777-83
Assay type: RNA in situ
MGI Accession ID: MGI:5642317
Gene symbol: Hcn4
Gene name: hyperpolarization-activated, cyclic nucleotide-gated K+ 4
Probe: Hcn4 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Specimens were postfixed in 4% paraformaldehyde, 0.2% glutaraldehyde.
Results
Specimen 1A: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: heart Present Single cells 1A Expression is in the cardiac mesoderm.

Specimen 1B: embryonic day 8.0 (more )
Note: 9 somites
Structure Level Pattern Image Note
TS12: sinus venosus Present 1B Symmetric expression, including the transverse middle portion.
TS12: sinus venosus left horn Present 1B Symmetric expression, including the transverse middle portion.
TS12: sinus venosus right horn Present 1B Symmetric expression, including the transverse middle portion.

Specimen 1C: embryonic day 8.0 (more )
Note: 9 somites
Structure Level Pattern Image Note
TS12: sinus venosus Present 1C Symmetric expression, including the transverse middle portion.
TS12: sinus venosus left horn Present 1C Symmetric expression, including the transverse middle portion.
TS12: sinus venosus right horn Present 1C Symmetric expression, including the transverse middle portion.

Specimen not shown E8: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: sinus venosus Present Expression is at the junction between the common cardinal veins and the sinus venosus.
TS12: venous system Present Expression is at the junction between the common cardinal veins and the sinus venosus.

Specimen 1D: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: sinus venosus Present 1D
TS13: common atrial chamber Present Regionally restricted 1D There is a group of expressing cells in the left atrium.

Specimen 1E: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: sinus venosus Present 1E
TS13: common atrial chamber Present Regionally restricted 1E There is a group of expressing cells in the left atrium.

Specimen 1F: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: sinus venosus Present 1F
TS13: common atrial chamber Present Regionally restricted 1F There is a group of expressing cells in the left atrium.

Specimen 1G: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: septum transversum Present 1G
TS14: sinus venosus right horn Present 1G

Specimen 1H: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: septum transversum Present 1H
TS14: sinus venosus left horn Present 1H

Specimen 1I: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: septum transversum Present 1I
TS14: sinus venosus left horn Present 1I

Specimen 1J: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: common atrial chamber Present Regionally restricted 1J Expression is in the left atrial wall.

Specimen 1K: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: common atrial chamber Present Regionally restricted 1K Expression is in the left atrial wall.

Specimen 1L: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: common atrial chamber Present Regionally restricted 1L Expression is in the left atrial wall.

Specimen 1M: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: common atrial chamber Present Regionally restricted 1M Expression is in the left atrial wall.

Specimen 2A: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: heart Present 2A
TS16: sinus venosus Present 2A
TS16: future brain Present Regionally restricted 2A Expression is in the proliferating neuroepithelia lining the brain ventricles.

Specimen 2B: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: heart Present 2B
TS16: sinus venosus Present 2B
TS16: future brain Present Regionally restricted 2B Expression is in the proliferating neuroepithelia lining the brain ventricles.

Specimen 2C: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: common atrial chamber right part Present Regionally restricted 2C Expression is in the dorsal part of the right wall.
TS16: sinus venosus right horn Present 2C

Specimen 2D: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: septum transversum Strong 2D
TS16: sinus venosus left horn Present 2D

Specimen 2E: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: common atrial chamber right part Present Regionally restricted 2E There is asymmetric expression in the dorsal wall of the right atrium.
TS16: sinus venosus right horn Present Regionally restricted 2E Expression is in the rostral portion.

Specimen 2F: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: common atrial chamber right part Present Regionally restricted 2F There is asymmetric expression in the dorsal wall of the right atrium.
TS16: sinus venosus right horn Present Regionally restricted 2F Expression is in the rostral portion.

Specimen 2G: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: heart Present Regionally restricted 2G There is asymmetric expression in the right side, at the junction between the common cardinal vein and the sinus venosus.
TS16: septum transversum Present 2G

Specimen 2H: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: heart Present Regionally restricted 2H There is asymmetric expression in the right side, at the junction between the common cardinal vein and the sinus venosus.
TS16: septum transversum Present 2H

Specimen 2I: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: future hindbrain Strong
TS16: future hindbrain roof plate Strong
TS16: diencephalon Present 2I
TS16: optic cup Present 2I
TS16: optic stalk Present 2I
TS16: telencephalon Present 2I

Specimen not shown E10: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: future midbrain Weak

Specimen 3A: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: right atrium Present Regionally restricted 3A This is a frontal view of the whole heart where no expression is seen. The dorsal view (3B) of the heart shows asymmetrical expression in the dorsal wall of the right atrium.

Specimen 3B: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: right atrium Present Regionally restricted 3B Asymmetrical expression in the dorsal wall of the right atrium.
TS20: venous system Present Regionally restricted 3B Expression is in the coronary sinus extending to the left atria.
TS20: common cardinal vein Present 3B
TS20: sinus venosus left horn Weak 3B

Specimen 3C: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: common cardinal vein Strong Regionally restricted 3C Expression is surrounding the orifice of the right common cardinal vein.
TS20: right atrium Strong Regionally restricted 3C Expression is in the dorsal wall.
TS20: sinus venosus left horn Weak 3C

Specimen 3D: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: common cardinal vein Present Regionally restricted 3D Expression is in the junction between the right common cardinal vein and the right atrial appendage. Some expression is in the left common cardinal vein.
TS20: right atrium Present Regionally restricted 3D Expression is in the junction between the right common cardinal vein and the right atrial appendage. Some expression is in the left common cardinal vein.
TS20: sinus venosus left horn Weak 3D

Specimen 3E: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: common cardinal vein Present Regionally restricted 3E Expression is at the junction between the right atrium and the common cardinal vein.
TS20: right atrium Present Regionally restricted 3E Expression is at the junction between the right atrium and the common cardinal vein.
TS20: sinus venosus left horn Present 3E

Specimen 4A: postnatal day 4 (more )
Structure Level Pattern Image Note
TS28: heart Strong Regionally restricted 4A Expression is surrounding the portion of the superior vena cava in close proximity to the right atrial appendage.
TS28: sinoatrial node Strong 4A

Specimen 4B: postnatal day 4 (more )
Structure Level Pattern Image Note
TS28: right atrium Strong Regionally restricted 4B Expressing cells occupy the junction between the superior vena cava and the right atrial appendage.
TS28: sinoatrial node Strong Regionally restricted 4B Expressing cells occupy the junction between the superior vena cava and the right atrial appendage.

Specimen 4C: postnatal day 4 (more )
Structure Level Pattern Image Note
TS28: vena cava Strong Regionally restricted 4C Expression is between the orifices of the superior and inferior vena cava.
TS28: right atrium Strong Regionally restricted 4C Expression is in the dorsal wall of the right atrium.
TS28: sinoatrial node Strong 4C

Specimen 4D: postnatal day 4 (more )
Structure Level Pattern Image Note
TS28: right atrium Strong Regionally restricted 4D Expression is at the in the junction between the superior vena cava and the right atrial appendage.
TS28: vena cava Strong Regionally restricted 4D Expression is at the in the junction between the superior vena cava and the right atrial appendage.
TS28: sinoatrial node Strong 4D

Specimen 5A: postnatal adult (more )
Structure Level Pattern Image Note
TS28: right atrium Present Regionally restricted 5A Expression is at the junction between the superior vena cava and the right atrial appendage.
TS28: sinoatrial node Present 5A

Specimen 5B: postnatal adult (more )
Structure Level Pattern Image Note
TS28: right atrium Present Regionally restricted 5B Expressing cells are surrounding the orifice of the superior vena cava, and extending caudally, following the crista terminalis as a border.
TS28: sinoatrial node Present 5B

Specimen 5C: postnatal adult (more )
Structure Level Pattern Image Note
TS28: right atrium Present Regionally restricted 5C Expressing cells are located surrounding the superior vena cava at the junction with the right atrial appendage.
TS28: sinoatrial node Present 5C


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/14/2024
MGI 6.23
The Jackson Laboratory