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Gene Expression Data
Assay Details
Assay
Reference: J:198561 Mikedis MM, et al., Widespread but tissue-specific patterns of interferon-induced transmembrane protein 3 (IFITM3, FRAGILIS, MIL-1) in the mouse gastrula. Gene Expr Patterns. 2013 Oct;13(7):225-39
Assay type: In situ reporter (knock in)
MGI Accession ID: MGI:5635467
Gene symbol: Runx1
Gene name: runt related transcription factor 1
Reporter: lacZ
Direct Detection
Results
Specimen 5F: embryonic day 8.25; Runx1tm2Spe/Runx1+ (more )
Note: 4 somites. Double labeled: blue - Runx1 reporter; brown - Ifitm3 (assay MGI:5635440).
Structure Level Pattern Image Note
TS12: allantois Present 5F
TS12: primitive streak Present 5F
TS12: embryo Present Regionally restricted 5F Expression is in the posterior dorsal epiblast.
TS12: amnion ectoderm Present Regionally restricted 5F Expression is in the amniotic ectoderm adjacent to the posterior region, allantois- and primitive streak-associated posterior visceral endoderm/hindgut.
Specimen 5G: embryonic day 8.5; Runx1tm2Spe/Runx1+ (more )
Note: 6 somites. Double labeled: blue - Runx1 reporter; brown - Ifitm3 (assay MGI:5635440).
Structure Level Pattern Image Note
TS13: embryo endoderm Present Regionally restricted 5G Expression is in the anterior endoderm overlying the heart, yolk sac hematopoietic cells.
Specimen 5H: embryonic day 9.0; Runx1tm2Spe/Runx1+ (more )
Note: 9 somites. Double labeled: blue - Runx1 reporter; brown - Ifitm3 (assay MGI:5635440).
Structure Level Pattern Image Note
TS14: hindgut diverticulum Present Regionally restricted 5H Expression is ventral.
TS14: vitelline artery Present 5H
Specimen 5I1: embryonic day 9.0; Runx1tm2Spe/Runx1+ (more )
Note: 12 somites. Double labeled: blue - Runx1 reporter; brown - Ifitm3 (assay MGI:5635440).
Structure Level Pattern Image Note
TS14: tail bud Present Regionally restricted 5I1 Expression is in the ventral ectodermal ridge.
Specimen 5I2: embryonic day 9.0; Runx1tm2Spe/Runx1+ (more )
Note: 12 somites. Double labeled: blue - Runx1 reporter; brown - Ifitm3 (assay MGI:5635440).
Structure Level Pattern Image Note
TS14: allantois Present 5I2
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory