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Gene Expression Data
Assay Details
Assay
Reference: J:40904 Bouillet P, et al., Developmental expression pattern of Stra6, a retinoic acid-responsive gene encoding a new type of membrane protein. Mech Dev. 1997 May;63(2):173-86
Assay type: RNA in situ
MGI Accession ID: MGI:5633975
Gene symbol: Stra6
Gene name: stimulated by retinoic acid gene 6
Probe: Stra6 cDNA1
Probe preparation: Antisense labelled with S35 RNA
Results
Specimen 7A/B: embryonic day 16.5 (more )
Note: C/D is an enlargement of the boxed area in A.
Structure Level Pattern Image Note
TS24: brain meninges Present 7A/B
TS24: choroid plexus Present 7A/B
TS24: inner ear epithelium Present 7A/B
TS24: tooth mesenchyme Present 7A/B
TS24: trigeminal ganglion Present 7A/B
TS24: corpus striatum Strong Regionally restricted 7C/D , 7A/B Expression is in the striatum microvasculature.
TS24: nasal mesenchyme Present Regionally restricted 7A/B Expression is in olfactory and respiratory mesenchyme.
TS24: nasal cavity respiratory epithelium Present Regionally restricted 7A/B
TS24: outer ear Present Regionally restricted 7A/B Expression is in the mesenchyme.

Specimen 8A/B: embryonic day 6.5 (more )
Structure Level Pattern Image Note
TS9: extraembryonic visceral endoderm Strong 8A/B
TS9: embryo Absent 8A/B

Specimen 8A/B mother: postnatal adult (more )
Note: Day 6.5 gestation.
Structure Level Pattern Image Note
TS28: uterus Strong Regionally restricted 8A/B Expression is in the innermost cells of the wall encircling the entire implantation site.

Specimen 8C/D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: chorioallantoic placenta Present 8C/D
TS15: yolk sac Present 8C/D
TS15: trophoblast giant cell Absent 8C/D

Specimen 8C/D mother: postnatal adult (more )
Structure Level Pattern Image Note
TS28: uterus Present Regionally restricted 8C/D Expression is in the antimesometrial and mesometrial poles.

Specimen 8E/F: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: labyrinthine zone Strong 8E/F
TS28: placenta Strong 8E/F
TS20: perioptic mesenchyme Present 8E/F
TS20: pigmented retinal epithelium Present 8E/F
TS20: lens vesicle Present Regionally restricted 8E/F Expression is in the anteriormost part.
TS20: optic stalk Present Regionally restricted 8E/F Expression is in the meninges of the optic nerve.
TS20: retina Present Regionally restricted 8E/F Expression is in the inner nuclear layer of the neural retina.
TS20: trophoblast giant cell Absent 8E/F
TS20: yolk sac Absent 8E/F

Specimen 8G/H: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: labyrinthine zone Strong 8G/H
TS28: placenta Strong 8G/H
TS20: trophoblast giant cell Absent 8G/H
TS20: yolk sac Absent 8G/H

Specimen 10A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: fronto-nasal process mesenchyme Present 10A
TS15: midbrain-hindbrain junction Present 10A
TS15: otocyst epithelium Present 10A
TS15: future forebrain Weak 10A
TS15: future midbrain Weak 10A
TS15: 1st branchial arch mandibular component mesenchyme Present Regionally restricted 10A Expression is in the central part.
TS15: branchial pouch Present Regionally restricted 10A Expression is in the epithelium.

Specimen 10B: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: dorsal root ganglion Strong Patchy 10B
TS19: nasal pit Strong 10B
TS19: esophagus mesenchyme Present 10B
TS19: inner ear epithelium Present 10B
TS19: intestine mesenchyme Present 10B
TS19: stomach mesenchyme Present 10B
TS19: vertebral cartilage condensation Present 10B
TS19: outer ear Present Regionally restricted 10B Expression is in the mesenchyme.
TS19: hindgut mesenchyme Present Regionally restricted 10B Expression is in the rectum.
TS19: pre-cartilage condensation Present Regionally restricted 10B Expression is in the mesenchyme surrounding the chondrogenic condensations.

Specimen 10C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: basal columns Present 10C
TS20: esophagus mesenchyme Present 10C
TS20: genital tubercle mesenchyme Present 10C
TS20: intestine mesenchyme Present 10C
TS20: mesonephros mesenchyme Present 10C
TS20: neurohypophysis infundibulum Present 10C
TS20: spinal cord floor plate Present 10C
TS20: stomach mesenchyme Present 10C
TS20: ureteral mesenchyme Present 10C
TS20: vertebral cartilage condensation Present 10C
TS20: hindgut mesenchyme Present Regionally restricted 10C Expression is in the rectum.
TS20: cartilage Present Regionally restricted 10C Expression is in the mesenchyme surrounding the chondrogenic condensations.
TS20: nasal cavity Strong 10C
TS20: spinal cord vascular element Strong 10C
TS20: primitive collecting duct Present Regionally restricted 10C Expression is in the uerteric bud mesenchyme.
TS20: urogenital ridge Absent 10C

Specimen 10D: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: lens Present Regionally restricted 10D Expression is in the anteriormost part.
TS21: optic nerve Present Regionally restricted 10D Expression is in the meninges of the optic nerve.
TS21: retina Present Regionally restricted 10D Expression is in the inner nuclear layer of the neural retina.
TS21: perioptic mesenchyme Present 10D
TS21: pigmented retinal epithelium Present 10D
TS21: dorsal root ganglion Strong Patchy 10D
TS21: lung mesenchyme Present Regionally restricted 10D Expression is in mesenchyme surrounding the bronchi.
TS21: primitive collecting duct Present Patchy 10D
TS21: renal cortex Present Patchy 10D
TS21: skeletal muscle Present Regionally restricted 10D Expression is in the skeletal muscle of the body and face.
TS21: hindlimb Present Regionally restricted 10D Expression is in the perichondrium.
TS21: rib pre-cartilage condensation Present Regionally restricted 10D Expression is in the perichondrium.

Specimen 10E/F: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: spinal cord vascular element Strong 10E/F
TS24: uterine horn Strong Regionally restricted 10E/F Expression is in the epithelium and mesenchyme.
TS24: oviduct Strong Regionally restricted 10E/F Expression is in the mesenchyme.
TS24: epithelial layer of oviduct Strong 10E/F
TS24: sympathetic ganglion Strong Patchy 10E/F
TS24: epithelium of vagina Present 10E/F
TS24: esophagus mesenchyme Present 10E/F
TS24: intestine mesenchyme Present 10E/F
TS24: rectum mesenchyme Present 10E/F
TS24: stomach mesenchyme Present 10E/F
TS24: female external genitalia Present Regionally restricted 10E/F Expression is in the mesenchyme.
TS24: ureter Present Regionally restricted 10E/F Expression is in the mesenchyme.
TS24: urethra of female Present Regionally restricted 10E/F Expression is in the mesenchyme.

Specimen not shown, A: postnatal adult (more )
Structure Level Pattern Image Note
TS28: choroid plexus Present
TS28: meninges Present

Specimen not shown, mother: postnatal adult (more )
Note: Day 7.5 and 8.5 gestation.
Structure Level Pattern Image Note
TS28: uterus Strong Regionally restricted Expression is in the innermost cells of the wall encircling the entire implantation site. Weak labeling up to day E13.5.

Specimen not shown, E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: infundibular recess of 3rd ventricle Present
TS19: myotome Present
TS19: cerebellum primordium Present Transcripts were seen in the cerbellum from E11.5-16.5.
TS19: limb mesenchyme Present Regionally restricted Expression is in the myogenic cells.

Specimen not shown, E16.5: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cerebellum Present Transcripts were seen in the cerbellum from E11.5-16.5.
TS24: ovary Present Patchy

Specimen not shown, E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: basal columns Present

Specimen not shown, E10.5: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: optic stalk Present Regionally restricted Expression is in the meninges of the optic nerve.
TS17: lens pit Present Regionally restricted Expression is in the anteriormost part.
TS17: optic cup Present Regionally restricted Expression is in the retinal pigment epithelium and the inner nuclear layer of the neural retina.
TS17: eye mesenchyme Present Regionally restricted Expression is in the periocular mesenchyme.


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/30/2024
MGI 6.23
The Jackson Laboratory