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Gene Expression Data
Assay Details
Assay
Reference: J:202263 Jolly LA, et al., The UPF3B gene, implicated in intellectual disability, autism, ADHD and childhood onset schizophrenia regulates neural progenitor cell behaviour and neuronal outgrowth. Hum Mol Genet. 2013 Dec 1;22(23):4673-87
Assay type: RNA in situ
MGI Accession ID: MGI:5615962
Gene symbol: Upf3a
Gene name: UPF3 regulator of nonsense transcripts homolog A (yeast)
Probe: Upf3a probe1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Two probes were described MGI:5615755 and MGI:5615756. Either may have been used in this assay.
Results
Specimen 1Ai: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: telencephalon Weak 1A Upf3a i Low expression levels were detected across the telencephalic wall.
Specimen S2 E10.5: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: central nervous system Present Widespread S2_Upf3a E10.5
Specimen S2 E14.5: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: brain Present Widespread S2_Upf3a E14.5
Specimen S2 E18.5: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: brain Present Widespread S2_Upf3a E18.5
Specimen S2 P2: postnatal day 2 (more )
Structure Level Pattern Image Note
TS27: brain Present Widespread S2_Upf3a P2
Specimen S2 P8: postnatal day 8 (more )
Structure Level Pattern Image Note
TS28: brain Present Widespread S2_Upf3a P8
Specimen S2 Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: brain Present Widespread S2_Upf3a Adult
Specimen S3 Cortex: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present S3_Upf3a Cortex
Specimen S3 Hippocampus: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hippocampus Present S3_Upf3a Hippocampus
Specimen S4 P2: postnatal day 2 (more )
Structure Level Pattern Image Note
TS27: cerebellum Present S4_Upf3a P2
Specimen S4 P8: postnatal day 8 (more )
Structure Level Pattern Image Note
TS28: cerebellum Present S4_Upf3a P8
Specimen S4 Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellum Present S4_Upf3a Adult
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory