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Gene Expression Data
Assay Details
Assay
Reference: J:173600 Huyhn K, et al., ATRX has a critical and conserved role in mammalian sexual differentiation. BMC Dev Biol. 2011;11:39
Assay type: RNA in situ
MGI Accession ID: MGI:5609522
Gene symbol: Atrx
Gene name: ATRX, chromatin remodeler
Probe: Atrx cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1A: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: gonad Weak Diffuse 1A Expression was diffuse and dispersed throughout the indifferent gonad.
TS19: mesonephros Weak Diffuse 1A To a lesser extent.

Specimen 1C: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: seminiferous cord Strong 1C
TS23: mesonephros Absent 1C
TS23: interstitium of the testis Present Diffuse 1C

Specimen 1E: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: ovary Present Punctate 1E Expressed in the cortex, indicative of germ cell staining. A low level of diffuse staining persisted throughout the somatic cells.
TS24: mesonephros Absent 1E

Specimen 4A: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: dorsal root ganglion Present 4A
TS19: forebrain Present 4A
TS19: forelimb bud Present 4A
TS19: hindbrain Present 4A
TS19: hindlimb bud Present 4A
TS19: neural tube Present 4A
TS19: nose Present 4A
TS19: oral region Present 4A
TS19: tail Present 4A
TS19: head Present Regionally restricted 4A Expressed in the craniofacial regions, more intense in the anterior aspects where the nose and mouth are situated.

Specimen 4B: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: dorsal root ganglion Present 4B
TS19: forelimb bud Present 4B
TS19: hindlimb bud Present 4B
TS19: nose Present 4B
TS19: oral region Present 4B
TS19: tail Present 4B

Specimen 4C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: foot Present 4C
TS20: forebrain Present 4C
TS20: hand Present 4C
TS20: nose Present 4C
TS20: oral region Present 4C
TS20: tail Present 4C

Specimen 4D: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: dorsal root ganglion Present 4D
TS20: hindbrain Present 4D
TS20: spinal cord Present 4D

Specimen 4E: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: foot Present 4E
TS21: forebrain Present 4E
TS21: genital tubercle Present 4E
TS21: hand Present 4E
TS21: nose Present 4E
TS21: oral region Present 4E

Specimen 4F: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: dorsal root ganglion Present 4F
TS21: hindbrain Present 4F
TS21: spinal cord Present 4F

Specimen 5A: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: genital tubercle of male Present Regionally restricted 5A Expression was more concentrated in the urethral groove on the ventral side.

Specimen 5B: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: genital tubercle of male Present Regionally restricted 5B Expression was more concentrated in the urethral groove on the ventral side.

Specimen not shown: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: gonad primordium Weak Diffuse Expression was diffuse and dispersed throughout the indifferent gonad.
TS18: mesonephros Weak Diffuse

Specimen not shown: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: gonad primordium Weak Diffuse Expression was diffuse and dispersed throughout the indifferent gonad.
TS18: mesonephros Present

Specimen not shown: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: seminiferous cord Strong
TS24: interstitium of the testis Present Diffuse
TS24: mesonephros Absent

Specimen not shown: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: genital swelling Present Regionally restricted Expression was more concentrated in the urethral groove on the ventral side.

Specimen not shown: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: genital tubercle Present Regionally restricted Expression was more concentrated in the urethral groove on the ventral side.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/30/2024
MGI 6.23
The Jackson Laboratory