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Gene Expression Data
Assay Details
Assay
Reference: J:43264 Ikeda Y, et al., Expression of reelin, the gene responsible for the reeler mutation, in embryonic development and adulthood in the mouse. Dev Dyn. 1997 Oct;210(2):157-72
Assay type: RNA in situ
MGI Accession ID: MGI:5588173
Gene symbol: Reln
Gene name: reelin
Probe: Reelin cDNA2
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 1A: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: embryo Present 1A Expression was detected in many regions.

Specimen 2A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: telencephalon Weak Widespread 2A Expression was weak throughout the neuroepithelium of the telencephalon, but expression was slightly stronger at the rostral and caudal ends.
TS15: diencephalon Weak Regionally restricted 2A
TS15: future midbrain Weak Regionally restricted 2A Expression was detected along the marginal zone.
TS15: future hindbrain Weak Regionally restricted 2A Weak expression was detected at the caudal end of the hindbrain.

Specimen 2B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cerebral cortex marginal layer Present 2B
TS20: neocortex Present 2B
TS20: midbrain Present Regionally restricted 2B Expression was detected in the tectum and the tegmentum.
TS20: cerebellum primordium Present 2B
TS20: medulla oblongata Present 2B
TS20: pons Present 2B
TS20: remnant of Rathke's pouch Present 2B
TS20: ganglionic eminence Absent 2B
TS20: hypothalamus Absent 2B Expression was not detected in the preoptic region.

Specimen 2C: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: brain Strong Regionally restricted 2C Strong expression was maintained in the same regions as in earlier stages.
TS22: cerebellum Strong 2C
TS22: cerebral cortex Strong 2C
TS22: hippocampus Strong 2C
TS22: main olfactory bulb Strong 2C
TS22: tectum Strong 2C
TS22: medullary velum Strong 2C
TS22: brainstem Present Regionally restricted 2C Expression was detected in the inferior olive.
TS22: thalamus Present Regionally restricted 2C Expression was detected in the anterior and intermediate thalamus.
TS22: hypothalamus Present Regionally restricted 2C Expression was detected in the anterior hypothalamus and preoptic region.

Specimen 2D: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: brain Present Regionally restricted 2D The expression pattern was similar to that observed at E14.5.
TS24: cerebral cortex Strong 2D
TS24: inferior colliculus Strong 2D Signal intensity was much higher in the inferior colliculus than in the superior colliculus.
TS24: superior colliculus Present 2D Signal intensity was much higher in the inferior colliculus than in the superior colliculus.

Specimen 2E,G/G': embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cerebral cortex marginal layer Strong 2G/G' , 2E
TS24: cortical plate Weak Single cells 2G/G' , 2E
TS24: cortical subplate Weak Single cells 2G/G' , 2E
TS24: hippocampus Present 2E

Specimen 2F: embryonic day 16.5; Relnrl/Relnrl (more )
Structure Level Pattern Image Note
TS24: cerebral cortex Absent 2F
TS24: hippocampus Absent 2F

Specimen 3A/A': embryonic day 8.5 (more )
Note: The embryo was just prior to turning and the neural groove was still open throughout its length.
Structure Level Pattern Image Note
TS13: blood island Present 3A/A'
TS13: foregut diverticulum Present 3A/A'
TS13: neural tube Present 3A/A'
TS13: somite Present 3A/A'

Specimen 3B/B': embryonic day 8.5 (more )
Note: The embryo was just prior to turning and the neural groove was still open throughout its length.
Structure Level Pattern Image Note
TS13: blood island Present 3B/B'
TS13: foregut diverticulum Present 3B/B'
TS13: neural tube Present 3B/B'

Specimen 4A/A': embryonic day 9.5 (more )
Note: Parasagittal section at a lateral level of the embryo.
Structure Level Pattern Image Note
TS15: optic cup Present 4A/A'
TS15: somite Present 4A/A'

Specimen 4B/B': embryonic day 9.5 (more )
Note: Parasagittal section at the middle of the embryo.
Structure Level Pattern Image Note
TS15: future spinal cord Present Regionally restricted 4B/B' Expression was detected at the cervical level of the spinal cord but not in the caudal region.
TS15: future brain Present 4B/B'
TS15: somite Present 4B/B'
TS15: trigeminal preganglion Present 4B/B'
TS15: hepatic primordium Strong 4B/B'

Specimen 4C/C': embryonic day 9.5 (more )
Note: Transverse section through the head.
Structure Level Pattern Image Note
TS15: facio-acoustic preganglion complex Present 4C/C'
TS15: future brain Present 4C/C'

Specimen 4D/D': embryonic day 9.5 (more )
Note: Transverse section through the abdomen.
Structure Level Pattern Image Note
TS15: future spinal cord Present Regionally restricted 4D/D' Expression was detected at the cervical level of the spinal cord but not in the caudal region.
TS15: hepatic primordium Strong 4D/D'
TS15: somite Present 4D/D'

Specimen 5A/A': embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: dorsal root ganglion Present 5A/A'
TS20: telencephalon Present 5A/A'
TS20: vomeronasal organ Present 5A/A'
TS20: embryo mesenchyme Present Regionally restricted 5A/A' Expression was detected in the condensed mesenchyme surrounding small developing blood vessels.
TS20: Meckel's cartilage Present Regionally restricted 5A/A' Expression was detected in the precartilage primordium.
TS20: mandibular process mesenchyme Present Regionally restricted 5A/A' Expression was detected in the precartilage primordium.
TS20: maxillary process mesenchyme Present Regionally restricted 5A/A' Expression was detected in the precartilage primordium.
TS20: nasal septum mesenchyme Present Regionally restricted 5A/A' Expression was detected in the precartilage primordium.
TS20: temporal bone Present Regionally restricted 5A/A' Expression was detected in the precartilage primordium.
TS20: limb pre-cartilage condensation Present 5A/A'
TS20: cranial nerve Present Regionally restricted 5A/A' Expression was detected along the olfactory and optic nerve fibers.
TS20: spinal cord Strong 5A/A' Expression was strong at both the cervical and thoracic levels.
TS20: somite Present 5A/A'
TS20: spinal cord mantle layer Present 5A/A'
TS20: basal columns Present Regionally restricted 5A/A' Expression was detected in part of the ependymal layer in the basal plate.
TS20: alar columns Weak 5A/A'

Specimen 5B/B': embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: dorsal root ganglion Present 5B/B'
TS20: liver Present 5B/B'
TS20: somite Present 5B/B'
TS20: stomach epithelium Present 5B/B'
TS20: spinal cord Strong 5B/B' Expression was strong in the spinal cord at both the cervical and thoracic levels.
TS20: basal columns Present Regionally restricted 5B/B' Expression was detected in part of the ependymal layer in the basal plate.
TS20: alar columns Weak 5B/B'

Specimen 6A: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: spinal cord Present 6A

Specimen 6B: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: liver Present 6B

Specimen 6D: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: metanephros Present 6D

Specimen 7A: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: pituitary gland Present 7A
TS22: blood vessel Present Regionally restricted 7A Expression was detected in endothelial cells surrounding small blood vessels along the body wall.

Specimen not shown: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: adrenal medulla Present
TS22: diaphragm Present
TS22: gut mesentery Present
TS22: heart Present
TS22: lung Present
TS22: testis Present

Specimen 7B: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: vibrissa dermal component Present Regionally restricted 7B Expression was detected in the dermal papilla of the vibrissae.
TS22: tooth Present 7B

Specimen 7C: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: blood vessel Present Regionally restricted 7C Expression was detected in endothelial cells surrounding small blood vessels along the body wall.
TS22: dental papilla Present 7C
TS22: tooth epithelium Present 7C

Specimen 7D: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: olfactory nerve Present 7D
TS22: vomeronasal organ Present 7D

Specimen 7E,F: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: olfactory nerve Present 7E , 7F

Specimen 8A/A',C/C': postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present Widespread 8C/C' , 8A/A' Expression was detected in all cortical layers 1-6.
TS28: hippocampus Present Non-Uniform 8A/A' Expression was detected mostly in neurons in the superficial layer with some detected in deeper layers.

Specimen 8B/B': postnatal adult; Relnrl/Relnrl (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Absent 8B/B'
TS28: hippocampus Absent 8B/B'

Specimen 9A/A': postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellum granule cell layer Weak 9A/A'

Specimen 9B/B': postnatal adult (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb mitral cell layer Strong 9B/B'
TS28: main olfactory bulb glomerular layer Strong 9B/B' Strong expression was noted in periglomerular cells.

Specimen 9C/C': postnatal adult (more )
Structure Level Pattern Image Note
TS28: spinal cord dorsal horn Present Regionally restricted 9C/C' Expression was localized to neurons in the outer lining of the dorsal horn.
TS28: spinal cord ventral horn Present 9C/C'

Specimen 9D/D': postnatal adult (more )
Structure Level Pattern Image Note
TS28: liver vascular element Present Regionally restricted 9D/D' Expression was restricted to endothelial cells along the sinusoidal capillaries and was not detected in the hepatic cells.

Specimen 9E/E': postnatal adult (more )
Structure Level Pattern Image Note
TS28: renal vasculature Present Regionally restricted 9E/E' Expression was detected by some endothelial cells along blood vessels.

Specimen 9F/F': postnatal adult (more )
Structure Level Pattern Image Note
TS28: seminiferous tubule Weak 9F/F'

Specimen 9G/G': postnatal adult (more )
Structure Level Pattern Image Note
TS28: ovary Present Regionally restricted 9G/G' Expression was localized to the interstitial region.
TS28: ovary follicle Absent 9G/G'

Specimen not shown: postnatal adult (more )
Structure Level Pattern Image Note
TS28: spleen Trace Regionally restricted Very weak expression was detected in some endothelial cells.
TS28: heart Absent
TS28: intestine Absent
TS28: lung Absent
TS28: thymus Absent


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory