Gene Expression Data
Assay Details
Assay
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Reference:
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J:186546
Scherptong RW, et al., Morphogenesis of outflow tract rotation during cardiac development: The pulmonary push concept. Dev Dyn. 2012 Sep;241(9):1413-22
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Assay type:
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Immunohistochemistry
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MGI Accession ID:
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MGI:5587036
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Gene symbol:
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Nkx2-5
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Gene name:
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NK2 homeobox 5
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Results
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Specimen
1b:
embryonic day 9.5
(more )
Specimen
1b:
(close )
Genetic Background:
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involves: Swiss
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
1f:
embryonic day 10.5
(more )
Specimen
1f:
(close )
Genetic Background:
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involves: Swiss
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Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS17: heart |
Strong |
Regionally restricted |
1f
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Expressed in the anterior heart field, including the coelomic wall, and in the outflow tract myocardium.
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TS17: outflow tract cardiac muscle |
Strong |
Clusters |
1f
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Expressed as a central cluster of cells ventral to the foregut, extending preferentially on the left side of the aortic sac and surrounding the left 6th pharyngeal arch artery. Absent on the right side in the region bordering the aortic wall.
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TS17: outflow tract endocardial tube |
Strong |
Regionally restricted |
1f
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Expressed in the left-side region of the coelomic wall. Largely absent expression in the coelomic wall on the right side.
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TS17: cardiac muscle tissue |
Present |
|
1f
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Specimen
2c:
embryonic day 11.5
(more )
Specimen
2c:
(close )
Genetic Background:
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involves: Swiss
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Age:
|
embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: outflow tract |
Present |
Regionally restricted |
2c
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Expressed as a mesenchymal column lining the pulmonary wall on the left side of the outflow tract and merging with the subpulmonary myocardium. There is no such expression on the aortic side.
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TS19: cardiac muscle tissue |
Present |
|
2c
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Specimen
2f:
embryonic day 11.5
(more )
Specimen
2f:
(close )
Genetic Background:
|
involves: Swiss
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
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Specimen
4b:
embryonic day 10.5
(more )
Specimen
4b:
(close )
Genetic Background:
|
involves: Swiss
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: outflow tract cardiac muscle |
Present |
Regionally restricted |
4b
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Expressed as an elongated column extending along the left side.
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TS17: heart mesentery |
Present |
Regionally restricted |
4b
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Expressed as a well-organized cluster of cells in the cardiac mesenchyme.
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TS17: pharynx mesenchyme |
Present |
Regionally restricted |
4b
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Expressed as a group of positive cells located behind the heart in the pre-pharyngeal mesoderm.
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Specimen
4e:
(close )
Genetic Background:
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involves: 129S1/Sv * 129X1/SvJ
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Mutant Allele(s):
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Vegfatm1Pec/Vegfatm1Pec
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: heart mesentery |
Present |
Regionally restricted |
4e
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Expressed as in wild-type in a cluster of cells in the cardiac mesenchyme.
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TS17: outflow tract cardiac muscle |
Present |
Regionally restricted |
4e
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Expressed in an abnormal very short column of cells extending along the left side.
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Specimen
not shown:
embryonic day 11.5
(more )
Specimen
not shown:
(close )
Genetic Background:
|
involves: Swiss
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: pharynx mesenchyme |
Present |
Regionally restricted |
|
Expressed as a central cluster of cells located in the pre-pharyngeal mesoderm dorsal to the level of the outflow tract.
|
Specimen
not shown:
embryonic day 12.5
(more )
Note: Shown as 3D-reconstructions in Fig. 3 and S1.
Specimen
not shown:
(close )
Genetic Background:
|
involves: Swiss
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
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Note:
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Shown as 3D-reconstructions in Fig. 3 and S1.
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: outflow tract |
Present |
Regionally restricted |
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Expressed in a column of mesenchymal cells found exclusively within the indentation at the orifice level at the pulmonary side but not in the aortic region.
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Specimen
not shown:
embryonic day 14.5
(more )
Note: Shown as 3D-reconstructions in Fig. 3 and S1.
Specimen
not shown:
(close )
Genetic Background:
|
involves: Swiss
|
Age:
|
embryonic day 14.5
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Sex:
|
Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
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Note:
|
Shown as 3D-reconstructions in Fig. 3 and S1.
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: outflow tract |
Absent |
|
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The mesenchymal column of expressing cells was no longer present.
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