Gene Expression Data
Assay Details
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Assay
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Reference:
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J:148405
Nel-Themaat L, et al., Morphometric analysis of testis cord formation in Sox9-EGFP mice. Dev Dyn. 2009 May;238(5):1100-10
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Assay type:
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In situ reporter (knock in)
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MGI Accession ID:
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MGI:5581626
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Gene symbol:
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Sox9
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Gene name:
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SRY (sex determining region Y)-box 9
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Reporter:
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GFP
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Direct Detection
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Results
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Specimen
1A:
embryonic day 11.5; Sox9tm1Haak/Sox9 +
(more  )
Note: tail somite stage 19
Specimen
1A:
(close  )
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Genetic Background:
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involves: 129S/SvEv * C57BL/6J * Swiss
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Mutant Allele(s):
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Sox9tm1Haak/Sox9+
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Age:
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embryonic day 11.5
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Sex:
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Male
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Type:
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Not Specified
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Note:
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tail somite stage 19
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: gonad |
Present |
Regionally restricted |
1A
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Expressed in the Sertoli and germ cell mass. Surrounded by a layer of enhanced green fluorescent protein (EGFP)-negative tissue.
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Specimen
1B:
embryonic day 12.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
1B:
(close )
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Genetic Background:
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involves: 129S/SvEv * C57BL/6J * Swiss
|
|
Mutant Allele(s):
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Sox9tm1Haak/Sox9+
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Age:
|
embryonic day 12.5
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Sex:
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Male
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Type:
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Not Specified
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| Structure |
Cell Type |
Level |
Pattern |
Image |
Note |
| TS20: germ cell of testis |
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Strong |
Regionally restricted |
1B
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Expressed along the entire length of the gonad. Expressed in the Sertoli and germ cell mass. Surrounded by a layer of enhanced green fluorescent protein (EGFP)-negative tissue.
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| TS20: testis |
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Strong |
Regionally restricted |
1B
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Expressed along the entire length of the gonad. Expressed in the Sertoli and germ cell mass. Surrounded by a layer of enhanced green fluorescent protein (EGFP)-negative tissue.
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| TS20: Sertoli cell |
Sertoli cell |
Strong |
Regionally restricted |
1B
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Specimen
1C:
embryonic day 14.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
1C:
(close )
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Genetic Background:
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involves: 129S/SvEv * C57BL/6J * Swiss
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Mutant Allele(s):
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Sox9tm1Haak/Sox9+
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|
Age:
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embryonic day 14.5
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Sex:
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Male
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Type:
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Not Specified
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| Structure |
Cell Type |
Level |
Pattern |
Image |
Note |
| TS22: germ cell of testis |
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Strong |
Regionally restricted |
1C
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Expressed along the entire length of the gonad. Expressed in the Sertoli and germ cell mass. Surrounded by a layer of enhanced green fluorescent protein (EGFP)-negative tissue.
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| TS22: testis |
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Strong |
Regionally restricted |
1C
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Expressed along the entire length of the gonad. Expressed in the Sertoli and germ cell mass. Surrounded by a layer of enhanced green fluorescent protein (EGFP)-negative tissue.
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| TS22: Sertoli cell |
Sertoli cell |
Strong |
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1C
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Specimen
1D:
embryonic day 15.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
1D:
(close )
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Genetic Background:
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involves: 129S/SvEv * C57BL/6J * Swiss
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Mutant Allele(s):
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Sox9tm1Haak/Sox9+
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Age:
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embryonic day 15.5
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Sex:
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Male
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Type:
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Not Specified
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Specimen
1E:
embryonic day 16.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
1E:
(close )
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Genetic Background:
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involves: 129S/SvEv * C57BL/6J * Swiss
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Mutant Allele(s):
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Sox9tm1Haak/Sox9+
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Age:
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embryonic day 16.5
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Sex:
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Male
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Type:
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Not Specified
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Specimen
1F:
embryonic day 16.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
1F:
(close )
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Genetic Background:
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involves: 129S/SvEv * C57BL/6J * Swiss
|
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Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
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Age:
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embryonic day 16.5
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Sex:
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Male
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Type:
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Not Specified
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Specimen
2B/C/D:
embryonic day 13.5; Sox9tm1Haak/Sox9 +
(more )
Note: Double labeled: green - Sox9 reporter; red - Sox9 protein (assay MGI:5581710).
Specimen
2B/C/D:
(close )
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Genetic Background:
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involves: 129S/SvEv * C57BL/6J * Swiss
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Mutant Allele(s):
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Sox9tm1Haak/Sox9+
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Age:
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embryonic day 13.5
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Sex:
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Male
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Note:
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Double labeled: green - Sox9 reporter; red - Sox9 protein (assay MGI:5581710).
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| Structure |
Cell Type |
Level |
Pattern |
Image |
Note |
| TS21: Sertoli cell |
Sertoli cell |
Present |
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2B
,
2C/D
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Expressed in the cytoplasm.
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Specimen
2F/G/H:
embryonic day 13.5; Sox9tm1Haak/Sox9 +
(more )
Note: Double labeled: green - Sox9 reporter; red - Sox9 protein (assay MGI:5581710).
Specimen
2F/G/H:
(close )
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Genetic Background:
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involves: 129S/SvEv * C57BL/6J * Swiss
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Mutant Allele(s):
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Sox9tm1Haak/Sox9+
|
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Age:
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embryonic day 13.5
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Sex:
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Male
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
|
|
Note:
|
Double labeled: green - Sox9 reporter; red - Sox9 protein (assay MGI:5581710).
|
| Structure |
Cell Type |
Level |
Pattern |
Image |
Note |
| TS21: Sertoli cell |
Sertoli cell |
Present |
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2F
,
2G/H
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Expressed in the cytoplasm.
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Specimen
4A:
embryonic day 11.5; Sox9tm1Haak/Sox9 +
(more )
Note: tail somite stage 19
Specimen
4A:
(close )
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Genetic Background:
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involves: 129S/SvEv * C57BL/6J * Swiss
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Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
|
|
Age:
|
embryonic day 11.5
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Sex:
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Male
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Type:
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Not Specified
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Note:
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tail somite stage 19
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: gonad |
Present |
Regionally restricted |
4A
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Expressed in Sertoli cells.
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Specimen
4B:
embryonic day 11.8; Sox9tm1Haak/Sox9 +
(more )
Note: tail somite stage 21
Specimen
4B:
(close )
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Genetic Background:
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involves: 129S/SvEv * C57BL/6J * Swiss
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Mutant Allele(s):
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Sox9tm1Haak/Sox9+
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Age:
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embryonic day 11.8
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Male
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Type:
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Not Specified
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Note:
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tail somite stage 21
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS19: gonad |
Present |
Regionally restricted |
4B
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Expressed in Sertoli cells.
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Specimen
4C:
embryonic day 12.1; Sox9tm1Haak/Sox9 +
(more )
Note: tail somite stage 24
Specimen
4C:
(close )
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Genetic Background:
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involves: 129S/SvEv * C57BL/6J * Swiss
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Mutant Allele(s):
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Sox9tm1Haak/Sox9+
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Age:
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embryonic day 12.1
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Male
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Type:
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Not Specified
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Note:
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tail somite stage 24
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Specimen
4D:
embryonic day 12.5; Sox9tm1Haak/Sox9 +
(more )
Note: tail somite stage 32
Specimen
4D:
(close )
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Genetic Background:
|
involves: 129S/SvEv * C57BL/6J * Swiss
|
|
Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
|
|
Age:
|
embryonic day 12.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Male
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Type:
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Not Specified
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Note:
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tail somite stage 32
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Specimen
4E:
embryonic day 14.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
4E:
(close )
|
Genetic Background:
|
involves: 129S/SvEv * C57BL/6J * Swiss
|
|
Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
|
|
Age:
|
embryonic day 14.5
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Sex:
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Male
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Type:
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Not Specified
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Specimen
5B:
embryonic day 14.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
5B:
(close )
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Genetic Background:
|
involves: 129S/SvEv * C57BL/6J * Swiss
|
|
Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
|
|
Age:
|
embryonic day 14.5
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Sex:
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Male
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Type:
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Not Specified
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Specimen
5C:
embryonic day 14.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
5C:
(close )
|
Genetic Background:
|
involves: 129S/SvEv * C57BL/6J * Swiss
|
|
Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
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|
Age:
|
embryonic day 14.5
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Sex:
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Male
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Type:
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Not Specified
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Specimen
7A:
embryonic day 14.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
7A:
(close )
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Genetic Background:
|
involves: 129S/SvEv * C57BL/6J * Swiss
|
|
Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
|
|
Age:
|
embryonic day 14.5
|
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Sex:
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Male
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Type:
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Not Specified
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Specimen
7B:
embryonic day 14.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
7B:
(close )
|
Genetic Background:
|
involves: 129S/SvEv * C57BL/6J * Swiss
|
|
Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
|
|
Age:
|
embryonic day 14.5
|
|
Sex:
|
Male
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Type:
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Not Specified
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Specimen
7C:
embryonic day 14.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
7C:
(close )
|
Genetic Background:
|
involves: 129S/SvEv * C57BL/6J * Swiss
|
|
Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
|
|
Age:
|
embryonic day 14.5
|
|
Sex:
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Male
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|
Type:
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Not Specified
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Specimen
7D:
embryonic day 14.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
7D:
(close )
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Genetic Background:
|
involves: 129S/SvEv * C57BL/6J * Swiss
|
|
Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
|
|
Age:
|
embryonic day 14.5
|
|
Sex:
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Male
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Type:
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Not Specified
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Specimen
not shown:
embryonic day 10.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
not shown:
(close )
|
Genetic Background:
|
involves: 129S/SvEv * C57BL/6J * Swiss
|
|
Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
|
|
Age:
|
embryonic day 10.5
|
|
Sex:
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Male
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|
Type:
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Not Specified
|
Specimen
not shown:
embryonic day 10.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
not shown:
(close )
|
Genetic Background:
|
involves: 129S/SvEv * C57BL/6J * Swiss
|
|
Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
|
|
Age:
|
embryonic day 10.5
|
|
Sex:
|
Female
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|
Type:
|
Not Specified
|
Specimen
not shown:
embryonic day 12.0; Sox9tm1Haak/Sox9 +
(more )
Note: tail somite stage 22
Specimen
not shown:
(close )
|
Genetic Background:
|
involves: 129S/SvEv * C57BL/6J * Swiss
|
|
Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
|
|
Age:
|
embryonic day 12.0
|
|
Sex:
|
Male
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|
Type:
|
Not Specified
|
|
Note:
|
tail somite stage 22
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: testis |
Strong |
Widespread |
|
Expressed along the entire length of the gonad.
|
Specimen
not shown:
embryonic day 12.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
not shown:
(close )
|
Genetic Background:
|
involves: 129S/SvEv * C57BL/6J * Swiss
|
|
Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Female
|
|
Type:
|
Not Specified
|
Specimen
not shown:
embryonic day 14.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
not shown:
(close )
|
Genetic Background:
|
involves: 129S/SvEv * C57BL/6J * Swiss
|
|
Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
|
|
Age:
|
embryonic day 14.5
|
|
Sex:
|
Female
|
|
Type:
|
Not Specified
|
Specimen
not shown:
embryonic day 15.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
not shown:
(close )
|
Genetic Background:
|
involves: 129S/SvEv * C57BL/6J * Swiss
|
|
Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
|
|
Age:
|
embryonic day 15.5
|
|
Sex:
|
Female
|
|
Type:
|
Not Specified
|
Specimen
not shown:
embryonic day 16.5; Sox9tm1Haak/Sox9 +
(more )
Specimen
not shown:
(close )
|
Genetic Background:
|
involves: 129S/SvEv * C57BL/6J * Swiss
|
|
Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
|
|
Age:
|
embryonic day 16.5
|
|
Sex:
|
Female
|
|
Type:
|
Not Specified
|
Specimen
not shown:
postnatal adult; Sox9tm1Haak/Sox9 +
(more )
Specimen
not shown:
(close )
|
Genetic Background:
|
involves: 129S/SvEv * C57BL/6J * Swiss
|
|
Mutant Allele(s):
|
Sox9tm1Haak/Sox9+
|
|
Age:
|
postnatal adult
|
|
Sex:
|
Male
|
|
Type:
|
Not Specified
|
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