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Gene Expression Data
Assay Details
Assay
Reference: J:150704 Alishahi A, et al., Regional expression of MTG genes in the developing mouse central nervous system. Dev Dyn. 2009 Jul 17;238(8):2095-2102
Assay type: RNA in situ
MGI Accession ID: MGI:5575876
Gene symbol: Ascl1
Gene name: achaete-scute family bHLH transcription factor 1
Probe: Ascl1 probe1
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 1E: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: telencephalon Present 1E
Specimen 2Q: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: telencephalon mantle layer Absent 2Q
TS19: telencephalon ventricular layer Present Regionally restricted 2Q Not expressed in the dorsal telencephalon.
Specimen 2R: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: telencephalon mantle layer Absent 2R
TS19: telencephalon ventricular layer Present Regionally restricted 2R Not expressed in the dorsal telencephalon.
Specimen 2S: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Regionally restricted 2S Expressed as a band in the thalamus.
Specimen 2T: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: midbrain Present Regionally restricted 2T Expressed in the caudal pretectum.
Specimen 3L: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: forebrain Present 3L
Specimen 5B: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: retina Present Scattered 5B
Specimen 6I: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: retina Present Regionally restricted 6I Expressed in the ganglion cell layer and the ventricular zone. Expression appeared to be higher in the ventricular zone.
Specimen 6J: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: retina Present Regionally restricted 6J Expressed in the ganglion cell layer and the ventricular zone. Expression appeared to be higher in the ventricular zone.
Specimen 7I: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: midbrain ventricular layer Present 7I
TS20: hindbrain ventricular layer Present Regionally restricted 7I Expressed in the dorsal hindbrain near the 4th ventricle.
Specimen 7J: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: midbrain ventricular layer Present 7J
TS20: hindbrain ventricular layer Present Regionally restricted 7J Expressed in the dorsal hindbrain near the 4th ventricle.
Specimen 8I: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: future spinal cord Present Regionally restricted 8I Expressed in a broad dorsal domain that encompasses dp3 to dp5 domain.
Specimen 8J: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: spinal cord Weak 8J
Specimen not shown: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: retina ganglion cell layer Present
TS27: retina Present Regionally restricted Expressed in the ganglion cell layer and the ventricular zone. Expression appeared to be higher in the ventricular zone.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory