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Gene Expression Data
Assay Details
Assay
Reference: J:150704 Alishahi A, et al., Regional expression of MTG genes in the developing mouse central nervous system. Dev Dyn. 2009 Jul 17;238(8):2095-2102
Assay type: RNA in situ
MGI Accession ID: MGI:5575778
Gene symbol: Cbfa2t3
Gene name: CBFA2/RUNX1 translocation partner 3
Probe: MTG16 probe
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 1D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: telencephalon mantle layer Present Regionally restricted 1D Expressed in the ganglionic eminences. The level of expression was much higher in the midial ganglionic eminence than in the lateral or caudal ganglionic eminence.

Specimen 2M: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: telencephalon mantle layer Present Regionally restricted 2M Expressed in the ganglionic eminences. The level of expression was much higher in the midial ganglionic eminence than in the lateral or caudal ganglionic eminence.

Specimen 2N: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: telencephalon mantle layer Present Regionally restricted 2N Expressed in the ganglionic eminences. The level of expression was much higher in the midial ganglionic eminence than in the lateral or caudal ganglionic eminence.

Specimen 2O: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Regionally restricted 2O Expressed weakly and broadly in the mantle zone of the thalamus. Expressed as a narrow band in the most rostro-ventral part of the thalamus.

Specimen 2P: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: midbrain Strong Regionally restricted 2P Expressed in the caudal pretectum.

Specimen 3K: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: cortical preplate Present 3K

Specimen 4E: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cortical subplate Present Regionally restricted 4E Expression was higher in the lateral part.
TS23: telencephalon marginal layer Present Regionally restricted 4E Expression was higher in the lateral part.

Specimen 4F: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cortical subplate Present Regionally restricted 4F Expression was higher in the lateral part.
TS23: telencephalon marginal layer Present Regionally restricted 4F Expression was higher in the lateral part.

Specimen 4G: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: thalamus Present Regionally restricted 4G Expressed in the ventral lateral geniculate nucleus, the paraventricular nucleus and intergeniculate leaflet.

Specimen 4I: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cortical subplate Present 4I
TS22: telencephalon marginal layer Present 4I

Specimen 4J: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cortical subplate Present 4J
TS23: telencephalon marginal layer Present 4J

Specimen 6G: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: retina Present Regionally restricted 6G Expressed in the ganglion cell layer and the ventricular zone. Expression appeared to be higher in the ganglion cell layer.

Specimen 6H: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: retina Present Regionally restricted 6H Enriched expression in the ganglion cell layer.

Specimen 7G: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: midbrain Present Regionally restricted 7G Expressed in the ventral midbrain.
TS20: hindbrain Present Regionally restricted 7G Expressed in part of the hindbrain.
TS20: cerebellum primordium Strong 7G

Specimen 7H: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: midbrain Present Regionally restricted 7H Expressed in the ventral midbrain.
TS20: hindbrain Present Regionally restricted 7H Expressed in part of the hindbrain.
TS20: cerebellum primordium Strong 7H

Specimen 8G: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: future spinal cord Strong Regionally restricted 8G Expressed in the mantle zone of the dorsal progenitor population. Strong expression in the motor neurons.

Specimen 8H: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: spinal cord lateral wall Present Diffuse 8H Expressed in most of the dorsal horn.

Specimen not shown: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: cerebral cortex Present Expression was largely down-regulated.
TS27: retina ganglion cell layer Present


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/30/2024
MGI 6.23
The Jackson Laboratory