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Gene Expression Data
Assay Details
Assay
Reference: J:161205 Moreno-Bravo JA, et al., Dynamic expression patterns of Nkx6.1 and Nkx6.2 in the developing mes-diencephalic basal plate. Dev Dyn. 2010 Jul;239(7):2094-101
Assay type: RNA in situ
MGI Accession ID: MGI:5573142
Gene symbol: Pou4f1
Gene name: POU domain, class 4, transcription factor 1
Probe: Pou4f1 probe1
Probe preparation: Antisense RNA
Results
Specimen 2C: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: midbrain Present Regionally restricted 2C Expression is in the putative area of the red nucleus.
Specimen 2D: embryonic day 11.5 (more )
Note: Color-coded overlays of adjacent sections. Colors: blue - Pou4f1; red - Nkx6-1 (assay MGI:5573141); green - Nkx6-2 (assay MGI:5572946).
Structure Level Pattern Image Note
TS19: midbrain Present Regionally restricted 2D Expression is in the putative area of the red nucleus.
Specimen 2G: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: midbrain Present Regionally restricted 2G Expression is as a longitudinal band in the basal plate.
Specimen 2H: embryonic day 11.5 (more )
Note: Color-coded overlays of adjacent sections. Colors: blue - Pou4f1; red - Nkx6-1 (assay MGI:5573141); green - Nkx6-2 (assay MGI:5572946).
Structure Level Pattern Image Note
TS19: midbrain Present Regionally restricted 2H Expression is as a longitudinal band in the basal plate.
Specimen 3C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: midbrain Present Regionally restricted 3C ExpExpression is in the putative area of the red nucleus.ression is in the putative area of the red nucleus.
Specimen 3D: embryonic day 12.5 (more )
Note: Color-coded overlays of adjacent sections. Colors: blue - Pou4f1; red - Nkx6-1 (assay MGI:5573141); green - Nkx6-2 (assay MGI:5572946).
Structure Level Pattern Image Note
TS20: midbrain Present Regionally restricted 3D Expression is in the putative area of the red nucleus.
Specimen 3G: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: midbrain Present Regionally restricted 3G Expression is in the putative area of the red nucleus.
TS20: diencephalon Present Regionally restricted 3G ExpExpression is in the diencephalic basal plate.ression is in the diencephalic basal plate.
Specimen 3H: embryonic day 12.5 (more )
Note: Color-coded overlays of adjacent sections. Colors: blue - Pou4f1; red - Nkx6-1 (assay MGI:5573141); green - Nkx6-2 (assay MGI:5572946).
Structure Level Pattern Image Note
TS20: midbrain Present Regionally restricted 3H Expression is in the putative area of the red nucleus.
TS20: diencephalon Present Regionally restricted 3H Expression is in the diencephalic basal plate.
Specimen 4I: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon Present Regionally restricted 4I Expression is in the area of the red nucleus.
Specimen 4J: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: midbrain Present Regionally restricted 4J Expression is in the area of the red nucleus.
Specimen 4K: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: midbrain Present Regionally restricted 4K Expression is in the area of the red nucleus.
Specimen 4L: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: midbrain Present Regionally restricted 4L Expression is in the area of the red nucleus.
TS23: hindbrain Present Regionally restricted 4L Expression is in the interpeduncular nucleus.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory