Gene Expression Data
Assay Details
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Assay
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Reference:
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J:124185
Matis C, et al., Identification of Lmo1 as part of a Hox-dependent regulatory network for hindbrain patterning. Dev Dyn. 2007 Sep;236(9):2675-84
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5555045
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Gene symbol:
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Lmo1
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Gene name:
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LIM domain only 1
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Probe:
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Lmo1 cDNA4
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Results
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Specimen
3A:
embryonic day 9.25
(more  )
Note: 20-25 somites.
Specimen
3A:
(close  )
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Genetic Background:
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CD-1
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Age:
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embryonic day 9.25
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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20-25 somites.
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Specimen
3B:
embryonic day 9.75
(more )
Note: 28-33 somites.
Specimen
3B:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 9.75
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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28-33 somites.
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Specimen
3C:
embryonic day 9.25
(more )
Note: 20-25 somites.
Specimen
3C:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 9.25
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Sex:
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Not Specified
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Type:
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section from whole mount
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Note:
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20-25 somites.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: rhombomere 2 |
Present |
Regionally restricted |
3C
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Expressed as single ventro-lateral stripes.
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Specimen
3D:
embryonic day 9.75
(more )
Note: 28-33 somites.
Specimen
3D:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 9.75
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Sex:
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Not Specified
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Type:
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section from whole mount
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Note:
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28-33 somites.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS16: rhombomere 2 |
Present |
Regionally restricted |
3D
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Expressed as ventral (in the mantle layer) and dorsal (both in the ventricular zone and the mantle layer) stripes.
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| TS16: rhombomere 2 ventricular layer |
Present |
Regionally restricted |
3D
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Expressed as ventral and dorsal stripes.
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Specimen
3E:
embryonic day 10.5
(more )
Note: 35-42 somites.
Specimen
3E:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Note:
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35-42 somites.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: rhombomere 2 |
Present |
Regionally restricted |
3E
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Expressed as ventral, medio-dorsal, medio-ventral and dorsal stripes. Strong expression in the ventral and dorsal stripes. Lower expression in the two stripes in between.
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Specimen
3F:
embryonic day 9.25
(more )
Note: 20-25 somites.
Specimen
3F:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 9.25
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Sex:
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Not Specified
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Type:
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section from whole mount
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Note:
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20-25 somites.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: rhombomere 4 |
Present |
Regionally restricted |
3F
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Expressed as single ventro-lateral stripes.
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Specimen
3G:
embryonic day 9.75
(more )
Note: 28-33 somites.
Specimen
3G:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 9.75
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Sex:
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Not Specified
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Type:
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section from whole mount
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Note:
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28-33 somites.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS16: rhombomere 4 |
Present |
Regionally restricted |
3G
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Expressed as ventral, medio-dorsal, medio-ventral and dorsal stripes.
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Specimen
3H:
embryonic day 10.5
(more )
Note: 35-42 somites.
Specimen
3H:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Note:
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35-42 somites.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: rhombomere 4 |
Present |
Regionally restricted |
3H
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Expressed as ventral, medio-dorsal, medio-ventral and dorsal stripes. Strong expression in the ventral and dorsal stripes. Lower expression in the two stripes in between.
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Specimen
3I:
embryonic day 9.25
(more )
Note: 20-25 somites.
Specimen
3I:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 9.25
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Sex:
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Not Specified
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Type:
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section from whole mount
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Note:
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20-25 somites.
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Specimen
3J:
embryonic day 9.75
(more )
Note: 28-33 somites.
Specimen
3J:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 9.75
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Sex:
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Not Specified
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Type:
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section from whole mount
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Note:
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28-33 somites.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS16: rhombomere 5 |
Present |
Regionally restricted |
3J
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Expressed as ventral, medio-dorsal, medio-ventral and dorsal stripes.
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Specimen
3K:
embryonic day 10.5
(more )
Note: 35-42 somites.
Specimen
3K:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Note:
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35-42 somites.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: rhombomere 5 |
Present |
Regionally restricted |
3K
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Expressed as ventral, medio-dorsal, medio-ventral and dorsal stripes. Strong expression in the ventral and dorsal stripes. Lower expression in the two stripes in between.
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Specimen
3L:
embryonic day 9.25
(more )
Note: 20-25 somites.
Specimen
3L:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 9.25
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Sex:
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Not Specified
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Type:
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section from whole mount
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Note:
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20-25 somites.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: rhombomere 5 |
Present |
Regionally restricted |
3L
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Expressed as single ventro-lateral stripes.
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| TS15: rhombomere 6 |
Present |
Regionally restricted |
3L
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Expressed as single ventro-lateral stripes.
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Specimen
3M:
embryonic day 9.75
(more )
Note: 28-33 somites.
Specimen
3M:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 9.75
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Sex:
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Not Specified
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Type:
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section from whole mount
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Note:
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28-33 somites.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS16: rhombomere 5 |
Present |
Regionally restricted |
3M
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Expressed as ventral, medio-dorsal, medio-ventral and dorsal stripes.
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| TS16: rhombomere 6 |
Present |
Regionally restricted |
3M
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Expressed as ventral, medio-dorsal, medio-ventral and dorsal stripes.
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Specimen
3N:
embryonic day 10.5
(more )
Note: 35-42 somites.
Specimen
3N:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Note:
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35-42 somites.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: rhombomere 5 |
Present |
Regionally restricted |
3N
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Expressed as ventral, medio-dorsal, medio-ventral and dorsal stripes. Strong expression in the ventral and dorsal stripes. Lower expression in the two stripes in between.
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| TS17: rhombomere 6 |
Present |
Regionally restricted |
3N
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Expressed as ventral, medio-dorsal, medio-ventral and dorsal stripes. Strong expression in the ventral and dorsal stripes. Lower expression in the two stripes in between.
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Specimen
3O:
embryonic day 9.25
(more )
Note: 20-25 somites.
Specimen
3O:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 9.25
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Sex:
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Not Specified
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Type:
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section from whole mount
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Note:
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20-25 somites.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: rhombomere 7 |
Present |
Regionally restricted |
3O
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Expressed as single ventro-lateral stripes.
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Specimen
3P:
embryonic day 9.75
(more )
Note: 28-33 somites.
Specimen
3P:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 9.75
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Sex:
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Not Specified
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Type:
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section from whole mount
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Note:
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28-33 somites.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS16: rhombomere 7 |
Present |
Regionally restricted |
3P
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Expressed as ventral, medio-dorsal, medio-ventral and dorsal stripes.
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Specimen
3Q:
embryonic day 10.5
(more )
Note: 35-42 somites.
Specimen
3Q:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Note:
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35-42 somites.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: rhombomere 7 |
Present |
Regionally restricted |
3Q
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Expressed as ventral, medio-dorsal, medio-ventral and dorsal stripes. Strong expression in the ventral and dorsal stripes. Lower expression in the two stripes in between.
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Specimen
4A:
embryonic day 10.5
(more )
Note: Flat-mount preparation.
Specimen
4A:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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Flat-mount preparation.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: rhombomere floor plate |
Present |
Regionally restricted |
4A
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Expressed as ventral columns on either side of the floor plate starting just rostral to the r1/r2 boundary and running through at least r6.
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| TS17: rhombomere 2 floor plate |
Strong |
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4A
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Expression was more prominent.
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| TS17: rhombomere 4 floor plate |
Strong |
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4A
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Expression was more prominent.
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| TS17: rhombomere |
Present |
Regionally restricted |
4A
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Expressed in ventral, medio-dorsal, medio-ventral and dorsal columns on either side of the floor plate starting just rostral to the r1/r2 boundary and running through at least r6.
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Specimen
4B:
(close )
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Genetic Background:
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involves: 129S2/SvPas
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Mutant Allele(s):
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Hoxa2tm1Ipc/Hoxa2tm1Ipc
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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Flat-mount preparation.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: rhombomere |
Present |
Regionally restricted |
4B
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Expression was selectively lacking in the r2-r3 portions of the dorsal columns normally extending from r2 to r6. Expression in the ventral columns was unchanged.
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Specimen
4C:
(close )
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Genetic Background:
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involves: 129
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Mutant Allele(s):
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Hoxb2tm1Fmr/Hoxb2tm1Fmr
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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Flat-mount preparation.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: rhombomere |
Present |
Regionally restricted |
4C
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There was a clear reduction of the ventral columns specifically in r4, whereas the remainder of the expression pattern was apparently unchanged.
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Specimen
5A:
embryonic day 10.5
(more )
Specimen
5A:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Specimen
5B:
(close )
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Genetic Background:
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involves: 129
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Mutant Allele(s):
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Hoxb2tm1Fmr/Hoxb2tm1Fmr
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: rhombomere 4 |
Present |
Regionally restricted |
5B
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Expression was selectively reduced in the ventral portion.
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