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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5542047
Gene symbol: Slc13a3
Gene name: solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
Probe: RIKEN clone D630011P21 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:13947: embryonic day 17.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS25: urinary system Present GUDMAP:13947
TS25: metanephros Present GUDMAP:13947
TS25: renal cortex Present GUDMAP:13947
TS25: cortical renal tubule Present Regionally restricted GUDMAP:13947 Regional expression in a subset of cortical renal tubules likely to include early proximal tubule, but uncertain if includes early distal tubules.
TS25: renal proximal tubule Present Regionally restricted GUDMAP:13947 Expression absent from presumptive S1 segment of early proximal tubule adjacent to renal corpuscle.
TS25: renal distal tubule Ambiguous GUDMAP:13947
TS25: anlage of loop of Henle of cortical renal tubule Absent GUDMAP:13947
TS25: renal connecting tubule Absent GUDMAP:13947
TS25: cortical renal tubule of capillary loop nephron group Absent GUDMAP:13947
TS25: cortical collecting duct Absent GUDMAP:13947
TS25: renal cortical interstitium Absent GUDMAP:13947
TS25: renal cortical vasculature Absent GUDMAP:13947
TS25: mature renal corpuscle Absent GUDMAP:13947
TS25: maturing renal corpuscle Absent GUDMAP:13947
TS25: capillary loop renal corpuscle Absent GUDMAP:13947
TS25: s-shaped body Absent GUDMAP:13947
TS25: comma-shaped body Absent GUDMAP:13947
TS25: renal vesicle Absent GUDMAP:13947
TS25: nephrogenic zone Absent GUDMAP:13947
TS25: nephrogenic interstitium Absent GUDMAP:13947
TS25: cap mesenchyme Absent GUDMAP:13947
TS25: pretubular aggregate Absent GUDMAP:13947
TS25: ureteric tip Absent GUDMAP:13947
TS25: ureteric tree terminal branch excluding tip itself Absent GUDMAP:13947
TS25: renal medulla Absent GUDMAP:13947
TS25: renal pelvis Absent GUDMAP:13947
TS25: pelvic urothelial lining Absent GUDMAP:13947
TS25: pelvic smooth muscle Absent GUDMAP:13947
TS25: perihilar interstitium Absent GUDMAP:13947
TS25: outer renal medulla Absent GUDMAP:13947
TS25: inner renal medulla Absent GUDMAP:13947
TS25: renal medullary vasculature Absent GUDMAP:13947
TS25: ureter Absent GUDMAP:13947
TS25: loop of Henle, outer medullary portion Absent GUDMAP:13947
TS25: outer medullary interstitium Absent GUDMAP:13947
TS25: outer medullary collecting duct Absent GUDMAP:13947
TS25: loop of Henle, inner medullary portion Absent GUDMAP:13947
TS25: inner medullary interstitium Absent GUDMAP:13947
TS25: inner medullary collecting duct Absent GUDMAP:13947

Specimen GUDMAP:13948: postnatal adult (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS28: urinary system Present GUDMAP:13948
TS28: metanephros Present GUDMAP:13948
TS28: renal cortex Present GUDMAP:13948
TS28: cortical renal tubule Present GUDMAP:13948
TS28: renal proximal tubule Present Regionally restricted GUDMAP:13948
TS28: renal proximal convoluted tubule Present Regionally restricted GUDMAP:13948
TS28: segment 2 of proximal tubule Present GUDMAP:13948
TS28: segment 1 of proximal tubule Absent GUDMAP:13948
TS28: proximal straight tubule, cortical portion Absent GUDMAP:13948
TS28: renal distal tubule Absent GUDMAP:13948
TS28: renal connecting tubule Absent GUDMAP:13948
TS28: mature renal corpuscle Absent GUDMAP:13948
TS28: cortical collecting duct Absent GUDMAP:13948
TS28: renal cortical interstitium Absent GUDMAP:13948
TS28: renal cortical vasculature Absent GUDMAP:13948
TS28: renal medulla Absent GUDMAP:13948
TS28: outer renal medulla Absent GUDMAP:13948
TS28: inner renal medulla Absent GUDMAP:13948
TS28: renal medullary vasculature Absent GUDMAP:13948
TS28: loop of Henle, outer medullary portion Absent GUDMAP:13948
TS28: thin descending limb of outer medulla Absent GUDMAP:13948
TS28: thin ascending limb of outer medulla Absent GUDMAP:13948
TS28: proximal straight tubule, outer medullary portion Absent GUDMAP:13948
TS28: premacula segment of distal straight tubule of outer medulla Absent GUDMAP:13948
TS28: outer medullary interstitium Absent GUDMAP:13948
TS28: outer stripe of outer medulla Absent GUDMAP:13948
TS28: inner stripe of outer medulla Absent GUDMAP:13948
TS28: outer medullary collecting duct Absent GUDMAP:13948
TS28: renal pelvis Absent GUDMAP:13948
TS28: cortical renal tubule of mature nephron group Present GUDMAP:13948
TS28: distal convoluted tubule Absent GUDMAP:13948
TS28: distal straight tubule of renal cortex Absent GUDMAP:13948
TS28: loop of Henle, inner medullary portion Absent GUDMAP:13948
TS28: inner medullary interstitium Absent GUDMAP:13948
TS28: inner medullary collecting duct Absent GUDMAP:13948

Specimen GUDMAP:13949: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: metanephros Absent GUDMAP:13949
TS23: ureter Absent GUDMAP:13949


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory