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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541987
Gene symbol: Egr1
Gene name: early growth response 1
Probe: RIKEN clone I730052D02 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:12563: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: cap mesenchyme Present Spotted GUDMAP:12563 single cell expression
TS23: nephrogenic zone Present GUDMAP:12563
TS23: metanephros Present GUDMAP:12563 Expression in single cells or small groups of cells in all structures where expression is indicated as being present. Often associated with location of red blood cells which may indicate expression in either red blood cell or endothelial cell precursors.
TS23: urinary system Present GUDMAP:12563
TS23: renal cortex Present GUDMAP:12563
TS23: renal medulla Present GUDMAP:12563
TS23: renal cortical interstitium Present Spotted GUDMAP:12563 single cell expression
TS23: renal medullary interstitium Present Spotted GUDMAP:12563 single cell expression
TS23: maturing renal corpuscle Present GUDMAP:12563
TS23: capillary loop renal corpuscle Present GUDMAP:12563
TS23: nephrogenic interstitium Present GUDMAP:12563
TS23: ureteric tip Absent GUDMAP:12563
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:12563
TS23: cortical collecting duct Absent GUDMAP:12563
TS23: s-shaped body Present Single cells GUDMAP:12563 Expression detected only in cleft of S-shaped body.
TS23: renal connecting tubule of s-shaped body Absent GUDMAP:12563
TS23: distal segment of s-shaped body Absent GUDMAP:12563
TS23: medial segment of s-shaped body Absent GUDMAP:12563
TS23: proximal segment of s-shaped body Absent GUDMAP:12563
TS23: presumptive endothelium of capillary loop renal corpuscle Ambiguous GUDMAP:12563
TS23: maturing glomerular tuft Present GUDMAP:12563
TS23: glomerular capillary system of maturing glomerular tuft Ambiguous GUDMAP:12563 Expression appears to be associated with capillaries, but is not detected in the endothelial cells of the capillaries themselves.
TS23: parietal epithelium of capillary loop renal corpuscle Absent GUDMAP:12563
TS23: presumptive mesangium of capillary loop renal corpuscle Absent GUDMAP:12563
TS23: visceral epithelium of capillary loop renal corpuscle Absent GUDMAP:12563
TS23: glomerular mesangium of maturing glomerular tuft Absent GUDMAP:12563
TS23: visceral epithelium of maturing renal corpuscle Absent GUDMAP:12563
TS23: glomerular basement membrane of maturing renal corpuscle Absent GUDMAP:12563
TS23: Bowman's capsule of maturing renal corpuscle Present GUDMAP:12563
TS23: parietal epithelium of maturing renal corpuscle Present Single cells GUDMAP:12563
TS23: comma-shaped body Ambiguous GUDMAP:12563
TS23: renal vesicle Present Regionally restricted GUDMAP:12563 distal expression; Expression only detected in the distal renal vesicle.
TS23: renal cortical capillary Ambiguous GUDMAP:12563 Expression appears to be associated with capillaries, but is not detected in the endothelial cells of the capillaries themselves.
TS23: renal cortical vasculature Ambiguous GUDMAP:12563
TS23: renal medullary vasculature Ambiguous GUDMAP:12563
TS23: renal medullary capillary Ambiguous GUDMAP:12563 Expression appears to be associated with capillaries, but is not detected in the endothelial cells of the capillaries themselves.
TS23: cortical renal tubule Absent GUDMAP:12563
TS23: renal cortical venous system Absent GUDMAP:12563
TS23: renal cortical arterial system Absent GUDMAP:12563
TS23: renal medullary arterial system Absent GUDMAP:12563
TS23: renal medullary venous system Absent GUDMAP:12563
TS23: immature loop of Henle Absent GUDMAP:12563
TS23: pelvic smooth muscle Absent GUDMAP:12563
TS23: perihilar interstitium Absent GUDMAP:12563
TS23: early tubule Present GUDMAP:12563
TS23: developing capillary loop stage nephron group Present GUDMAP:12563
TS23: maturing nephron Present GUDMAP:12563
TS23: late tubule Present GUDMAP:12563
TS23: medullary collecting duct Present GUDMAP:12563
TS23: pelvic urothelial lining Present Single cells GUDMAP:12563
TS23: renal pelvis Present GUDMAP:12563
TS23: collecting duct Present GUDMAP:12563
TS23: ureteric trunk Present GUDMAP:12563
TS23: renal interstitium Present GUDMAP:12563
TS23: ureter Present GUDMAP:12563
TS23: renal small blood vessel Ambiguous GUDMAP:12563
TS23: renal capillary Ambiguous GUDMAP:12563
TS23: ureteral vasculature Ambiguous GUDMAP:12563 Expression appears to be associated with capillaries, but is not detected in the endothelial cells of the capillaries themselves.
TS23: ureteral mesenchyme Absent GUDMAP:12563
TS23: urothelium of ureter Absent GUDMAP:12563
TS23: renal vasculature Ambiguous GUDMAP:12563
TS23: distal renal vesicle Present GUDMAP:12563
TS23: proximal renal vesicle Absent GUDMAP:12563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/07/2024
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