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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541914
Gene symbol: Col9a1
Gene name: collagen, type IX, alpha 1
Probe: RIKEN clone 1110031E13 subclone 2
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:7301: embryonic day 10.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS17: genitourinary system Absent GUDMAP:7301
TS17: mesonephros Ambiguous GUDMAP:7301
TS17: mesonephros mesenchyme Ambiguous GUDMAP:7301
Specimen GUDMAP:7302: embryonic day 12.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS20: female reproductive system Present GUDMAP:7302
TS20: mesonephros of female Present GUDMAP:7302
TS20: mesonephric mesenchyme of female Present GUDMAP:7302 signal not detected in the lateral edge of the mesenchyme surrounding the paramesonephric duct
TS20: urogenital mesentery Present GUDMAP:7302
TS20: ovary Ambiguous GUDMAP:7302 signal was only seen in the rostral and caudal tips of the ovary
Specimen GUDMAP:7303: embryonic day 12.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS20: male reproductive system Present GUDMAP:7303
TS20: mesonephros of male Present GUDMAP:7303
TS20: mesonephric mesenchyme of male Present GUDMAP:7303 signal not detected in the lateral edge of the mesenchyme surrounding the paramesonephric duct
TS20: urogenital mesentery Present GUDMAP:7303
TS20: testis Ambiguous GUDMAP:7303 signal was strongest in the rostral and caudal tips of the testis
Specimen GUDMAP:7304: embryonic day 12.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS20: urinary system Present GUDMAP:7304
TS20: urinary system mesentery Present GUDMAP:7304
TS20: urogenital mesentery Present GUDMAP:7304
TS20: metanephros Present GUDMAP:7304
TS20: renal interstitium Present GUDMAP:7304
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/30/2024
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