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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541905
Gene symbol: Shh
Gene name: sonic hedgehog
Probe: RIKEN clone D430024L03 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:7152: embryonic day 12.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS20: primitive bladder Present GUDMAP:7152
TS20: metanephros Present GUDMAP:7152
TS20: primitive collecting duct Present GUDMAP:7152
TS20: ureteric trunk Present GUDMAP:7152
TS20: ureter Present GUDMAP:7152
TS20: nephric duct, metanephric portion Present GUDMAP:7152

Specimen GUDMAP:7153: embryonic day 12.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS20: nephric duct of male, mesonephric portion Present GUDMAP:7153
TS20: nephric duct of male, rest of Present GUDMAP:7153
TS20: mesonephric tubule of male Present GUDMAP:7153
TS20: testis Absent GUDMAP:7153
TS20: mesonephric mesenchyme of male Absent GUDMAP:7153
TS20: paramesonephric duct of male, mesonephric portion Absent GUDMAP:7153
TS20: paramesonephric duct of male, rest of Absent GUDMAP:7153

Specimen GUDMAP:7154: embryonic day 12.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS20: nephric duct of female, mesonephric portion Present GUDMAP:7154
TS20: nephric duct of female, rest of Present GUDMAP:7154
TS20: mesonephric tubule of female Present GUDMAP:7154
TS20: ovary Absent GUDMAP:7154
TS20: mesonephric mesenchyme of female Absent GUDMAP:7154
TS20: paramesonephric duct of female, mesonephric portion Absent GUDMAP:7154
TS20: paramesonephric duct of female, rest of Absent GUDMAP:7154

Specimen GUDMAP:7462: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: bladder Present GUDMAP:7462 In some sections Shh signal is in all layers of the bladder epithelium and in other sections is only in the deep cellular layers of bladder.
TS23: urothelium of bladder Present GUDMAP:7462
TS23: superficial cell layer of ureter Present GUDMAP:7462
TS23: intermediate cell layer of ureter Present GUDMAP:7462
TS23: basal cell layer of ureter Present GUDMAP:7462

Specimen GUDMAP:8896: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: metanephros Present Regionally restricted GUDMAP:8896
TS23: renal cortex Present GUDMAP:8896
TS23: cortical collecting duct Present Regionally restricted GUDMAP:8896 graded expression; signal detected in a subset of cortical ducts; strongest signal closer to the medulla
TS23: renal medulla Present GUDMAP:8896
TS23: medullary collecting duct Present GUDMAP:8896
TS23: collecting duct Present Regionally restricted GUDMAP:8896
TS23: ureteric trunk Present GUDMAP:8896
TS23: renal capsule Absent GUDMAP:8896
TS23: nephrogenic zone Absent GUDMAP:8896
TS23: nephrogenic interstitium Absent GUDMAP:8896
TS23: cap mesenchyme Absent GUDMAP:8896
TS23: pretubular aggregate Absent GUDMAP:8896
TS23: ureteric tip Absent GUDMAP:8896
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:8896
TS23: renal vesicle Absent GUDMAP:8896
TS23: comma-shaped body Absent GUDMAP:8896
TS23: s-shaped body Absent GUDMAP:8896
TS23: capillary loop renal corpuscle Absent GUDMAP:8896
TS23: maturing renal corpuscle Absent GUDMAP:8896
TS23: cortical renal tubule Absent GUDMAP:8896
TS23: renal cortical interstitium Absent GUDMAP:8896
TS23: renal cortical vasculature Absent GUDMAP:8896
TS23: immature loop of Henle Absent GUDMAP:8896
TS23: renal medullary interstitium Absent GUDMAP:8896
TS23: renal medullary vasculature Absent GUDMAP:8896
TS23: renal pelvis Absent GUDMAP:8896

Specimen GUDMAP:13630: postnatal day 2 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS27: vasculature of bladder Absent GUDMAP:13630
TS27: adventitia of bladder Absent GUDMAP:13630
TS27: serosa of bladder Absent GUDMAP:13630
TS27: detrusor muscle of bladder Absent GUDMAP:13630
TS27: lamina propria of bladder Absent GUDMAP:13630
TS27: urothelium of bladder Absent GUDMAP:13630
TS27: bladder Absent GUDMAP:13630


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/21/2024
MGI 6.23
The Jackson Laboratory