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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541830
Gene symbol: Hmgcs2
Gene name: 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2
Probe: RIKEN clone 1300004J23 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:11045: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: coelomic epithelium of testis Absent GUDMAP:11045
TS21: interstitium of the testis Absent GUDMAP:11045
TS21: paramesonephric duct of male, rest of Absent GUDMAP:11045
TS21: nephric duct of male, rest of Absent GUDMAP:11045
TS21: mesonephros of male Absent GUDMAP:11045
TS21: primary sex cord Ambiguous GUDMAP:11045 uncertain expression
TS21: testis Ambiguous GUDMAP:11045

Specimen GUDMAP:11046: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the male is shown. Annotators reported the male expression pattern in the metanephros is identical to female.
Structure Level Pattern Image Note
TS21: urinary system Absent GUDMAP:11046
TS21: metanephros Absent GUDMAP:11046
TS21: ureter Absent GUDMAP:11046
TS21: urinary system mesentery Absent GUDMAP:11046

Specimen GUDMAP:11047: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the male is shown. Annotators reported the male expression pattern in the urogenital sinus is identical to female.
Structure Level Pattern Image Note
TS21: urinary system Absent GUDMAP:11047
TS21: urogenital sinus Absent GUDMAP:11047
TS21: ureter Absent GUDMAP:11047

Specimen GUDMAP:11048: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: mesonephros of female Absent GUDMAP:11048
TS21: paramesonephric duct of female, rest of Absent GUDMAP:11048
TS21: nephric duct of female, rest of Absent GUDMAP:11048
TS21: surface epithelium of ovary Absent GUDMAP:11048
TS21: ovary Present Spotted GUDMAP:11048
TS21: germ cell of ovary Ambiguous GUDMAP:11048 possible expression
TS21: female reproductive system Present GUDMAP:11048
TS21: reproductive system Present GUDMAP:11048

Specimen GUDMAP:12224: embryonic day 11.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS19: metanephros Absent GUDMAP:12224
TS19: nephric duct, metanephric portion Absent GUDMAP:12224
TS19: mesonephros Absent GUDMAP:12224
TS19: gonad Absent GUDMAP:12224 No expression detected in female gonad or mesonephros.
TS19: nephric duct, mesonephric portion Absent GUDMAP:12224
TS19: nephric duct Absent GUDMAP:12224
TS19: parametanephric mesenchyme Absent GUDMAP:12224
TS19: mesonephros mesenchyme Absent GUDMAP:12224
TS19: mesonephric tubule Absent GUDMAP:12224
TS19: paramesonephric duct Absent GUDMAP:12224

Specimen GUDMAP:12225: embryonic day 11.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS19: metanephros Absent GUDMAP:12225
TS19: nephric duct, metanephric portion Absent GUDMAP:12225
TS19: mesonephros Absent GUDMAP:12225
TS19: gonad Present GUDMAP:12225 Strong expression detected in male gonad.
TS19: reproductive system Present GUDMAP:12225
TS19: nephric duct, mesonephric portion Absent GUDMAP:12225
TS19: nephric duct Absent GUDMAP:12225
TS19: parametanephric mesenchyme Absent GUDMAP:12225
TS19: mesonephros mesenchyme Absent GUDMAP:12225
TS19: mesonephric tubule Absent GUDMAP:12225
TS19: paramesonephric duct Absent GUDMAP:12225

Specimen GUDMAP:12226: embryonic day 12.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS20: mesonephros of female Absent GUDMAP:12226
TS20: paramesonephric duct of female, rest of Absent GUDMAP:12226
TS20: nephric duct of female, rest of Absent GUDMAP:12226
TS20: ovary Present GUDMAP:12226
TS20: mesenchymal stroma of ovary Present GUDMAP:12226
TS20: female reproductive system Present GUDMAP:12226
TS20: reproductive system Present GUDMAP:12226
TS20: germ cell of ovary Ambiguous GUDMAP:12226
TS20: surface epithelium of ovary Absent GUDMAP:12226
TS20: developing vasculature of ovary Absent GUDMAP:12226

Specimen GUDMAP:12227: embryonic day 12.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS20: mesonephros of male Absent GUDMAP:12227
TS20: paramesonephric duct of male, rest of Absent GUDMAP:12227
TS20: nephric duct of male, rest of Absent GUDMAP:12227
TS20: testis Present Regionally restricted GUDMAP:12227
TS20: primary sex cord Present Graded GUDMAP:12227 Expression strength in primary sex cords appears strongest at the poles of the testis and weakest in the center of the testis.
TS20: male reproductive system Present GUDMAP:12227
TS20: reproductive system Present GUDMAP:12227
TS20: coelomic epithelium of testis Absent GUDMAP:12227
TS20: interstitium of the testis Absent GUDMAP:12227
TS20: developing vasculature of testis Absent GUDMAP:12227

Specimen GUDMAP:12228: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: mesonephros of female Absent GUDMAP:12228
TS21: paramesonephric duct of female, rest of Absent GUDMAP:12228
TS21: nephric duct of female, rest of Absent GUDMAP:12228
TS21: surface epithelium of ovary Absent GUDMAP:12228
TS21: developing vasculature of ovary Absent GUDMAP:12228
TS21: germ cell of ovary Ambiguous GUDMAP:12228
TS21: female reproductive system Present GUDMAP:12228
TS21: reproductive system Present GUDMAP:12228
TS21: mesenchymal stroma of ovary Present GUDMAP:12228
TS21: ovary Present GUDMAP:12228 Expression likely in mesenchymal stroma. Uncertain if expression is also in the germ cells of ovary.

Specimen GUDMAP:12229: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: mesonephros of male Ambiguous GUDMAP:12229
TS21: paramesonephric duct of male, rest of Absent GUDMAP:12229
TS21: nephric duct of male, rest of Absent GUDMAP:12229
TS21: testis Present Regionally restricted GUDMAP:12229
TS21: primary sex cord Present GUDMAP:12229
TS21: male reproductive system Present GUDMAP:12229
TS21: reproductive system Present GUDMAP:12229
TS21: coelomic epithelium of testis Absent GUDMAP:12229
TS21: interstitium of the testis Absent GUDMAP:12229
TS21: developing vasculature of testis Absent GUDMAP:12229
TS21: rete testis Absent GUDMAP:12229
TS21: mesonephric mesenchyme of male Ambiguous GUDMAP:12229
TS21: nephric duct of male, mesonephric portion Absent GUDMAP:12229
TS21: mesonephric tubule of male Absent GUDMAP:12229
TS21: paramesonephric duct of male, mesonephric portion Absent GUDMAP:12229
TS21: coelomic epithelium of male mesonephros Absent GUDMAP:12229

Specimen GUDMAP:12230: embryonic day 14.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS22: ovary Present GUDMAP:12230
TS22: female reproductive system Present GUDMAP:12230
TS22: reproductive system Present GUDMAP:12230
TS22: germ cell of ovary Ambiguous GUDMAP:12230
TS22: developing vasculature of ovary Absent GUDMAP:12230
TS22: nephric duct of female, rest of Absent GUDMAP:12230
TS22: paramesonephric duct of female, rest of Absent GUDMAP:12230
TS22: mesonephros of female Absent GUDMAP:12230
TS22: surface epithelium of ovary Absent GUDMAP:12230
TS22: mesenchymal stroma of ovary Ambiguous GUDMAP:12230

Specimen GUDMAP:12231: embryonic day 14.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS22: testis Present GUDMAP:12231
TS22: primary sex cord Present GUDMAP:12231
TS22: male reproductive system Present GUDMAP:12231
TS22: reproductive system Present GUDMAP:12231
TS22: coelomic epithelium of testis Absent GUDMAP:12231
TS22: interstitium of the testis Ambiguous GUDMAP:12231
TS22: developing vasculature of testis Absent GUDMAP:12231
TS22: rete testis Absent GUDMAP:12231
TS22: mesonephros of male Ambiguous GUDMAP:12231

Specimen GUDMAP:12232: embryonic day 15.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS23: ovary Present GUDMAP:12232
TS23: paramesonephric duct of female, rest of Absent GUDMAP:12232
TS23: mesonephros of female Absent GUDMAP:12232
TS23: germ cell of ovary Ambiguous GUDMAP:12232
TS23: female reproductive system Present GUDMAP:12232
TS23: reproductive system Present GUDMAP:12232
TS23: mesenchymal stroma of ovary Present GUDMAP:12232
TS23: nephric duct of female, rest of Absent GUDMAP:12232

Specimen GUDMAP:12233: embryonic day 15.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS23: testis Absent GUDMAP:12233
TS23: nephric duct of male, rest of Absent GUDMAP:12233
TS23: degenerating rest of paramesonephric duct of male Absent GUDMAP:12233
TS23: seminiferous cord Absent GUDMAP:12233
TS23: coelomic epithelium of testis Absent GUDMAP:12233
TS23: interstitium of the testis Absent GUDMAP:12233
TS23: developing vasculature of testis Absent GUDMAP:12233
TS23: mesonephros of male Absent GUDMAP:12233
TS23: rete testis Absent GUDMAP:12233


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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory