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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541816
Gene symbol: Ctxn3
Gene name: cortexin 3
Probe: RIKEN clone A730024G14 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:7400: embryonic day 10.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS17: mesonephric tubule Present GUDMAP:7400 Strongest expression in the mesonephric tubules. Possible that expression is in the mesonephric glomeruli.
TS17: cloaca associated mesenchyme Present GUDMAP:7400
TS17: gonad primordium Absent GUDMAP:7400
TS17: nephric duct, metanephric portion Ambiguous GUDMAP:7400
TS17: mesonephros mesenchyme Ambiguous GUDMAP:7400
Specimen GUDMAP:7401: embryonic day 12.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS20: early nephron Present GUDMAP:7401
TS20: primitive bladder Absent GUDMAP:7401
TS20: ureter Absent GUDMAP:7401
TS20: urogenital mesentery Absent GUDMAP:7401
Specimen GUDMAP:7402: embryonic day 12.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS20: mesonephric tubule of male Present GUDMAP:7402
TS20: mesonephric mesenchyme of male Absent GUDMAP:7402
TS20: urogenital mesentery Absent GUDMAP:7402
TS20: paramesonephric duct of male, mesonephric portion Absent GUDMAP:7402
TS20: paramesonephric duct of male, rest of Absent GUDMAP:7402
TS20: nephric duct of male, mesonephric portion Absent GUDMAP:7402
TS20: nephric duct of male, rest of Absent GUDMAP:7402
Specimen GUDMAP:8885: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: metanephros Present Spotted GUDMAP:8885
Specimen GUDMAP:9092: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: female reproductive system Present Regionally restricted GUDMAP:9092
TS21: ovary Present GUDMAP:9092
TS21: mesonephros of female Present Regionally restricted GUDMAP:9092 possible weak expression in the medial mesenchyme adjacent to the ovary
TS21: mesonephric mesenchyme of female Present Regionally restricted GUDMAP:9092 dorsal expression; weak expression in the medial dorsal mesenchyme adjacent to the ovary
TS21: mesonephric tubule of female Absent GUDMAP:9092
TS21: nephric duct of female, mesonephric portion Absent GUDMAP:9092
TS21: paramesonephric duct of female, mesonephric portion Absent GUDMAP:9092
TS21: coelomic epithelium of female mesonephros Absent GUDMAP:9092
TS21: nephric duct of female, rest of Absent GUDMAP:9092
TS21: epithelium of nephric duct of female Absent GUDMAP:9092
TS21: mesenchyme of nephric duct of female Absent GUDMAP:9092
TS21: paramesonephric duct of female, rest of Absent GUDMAP:9092
TS21: epithelium of rest of paramesonephric duct of female Absent GUDMAP:9092
TS21: mesenchyme of rest of paramesonephric duct of female Absent GUDMAP:9092
Specimen GUDMAP:9093: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: urinary system Present GUDMAP:9093
TS21: metanephros Present Ubiquitous GUDMAP:9093 ubiquitous expression with different intensities of expression strength seen; strongest signal in spotted pattern which may be early nephrons
TS21: nephrogenic zone Present GUDMAP:9093
TS21: renal capsule Ambiguous GUDMAP:9093
TS21: nephrogenic interstitium Ambiguous GUDMAP:9093
TS21: cap mesenchyme Ambiguous GUDMAP:9093
TS21: pretubular aggregate Ambiguous GUDMAP:9093
TS21: ureteric tip Ambiguous GUDMAP:9093
TS21: primitive collecting duct Ambiguous GUDMAP:9093
TS21: renal vasculature Ambiguous GUDMAP:9093
TS21: early nephron Ambiguous GUDMAP:9093
Specimen GUDMAP:9094: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: urinary system Present GUDMAP:9094
TS21: urogenital sinus Present GUDMAP:9094
TS21: primitive bladder Present GUDMAP:9094
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/14/2024
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