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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541699
Gene symbol: Hnf4a
Gene name: hepatic nuclear factor 4, alpha
Probe: RIKEN clone F530004D08 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:12531: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: nephrogenic zone Absent GUDMAP:12531
TS23: nephrogenic interstitium Absent GUDMAP:12531
TS23: cap mesenchyme Absent GUDMAP:12531
TS23: pretubular aggregate Absent GUDMAP:12531
TS23: ureteric tip Absent GUDMAP:12531
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:12531
TS23: renal vesicle Absent GUDMAP:12531
TS23: comma-shaped body Absent GUDMAP:12531
TS23: renal cortical interstitium Absent GUDMAP:12531
TS23: cortical collecting duct Absent GUDMAP:12531
TS23: renal cortical vasculature Absent GUDMAP:12531
TS23: medullary collecting duct Absent GUDMAP:12531
TS23: renal medullary interstitium Absent GUDMAP:12531
TS23: renal medullary vasculature Absent GUDMAP:12531
TS23: renal pelvis Absent GUDMAP:12531
TS23: collecting duct Absent GUDMAP:12531
TS23: renal interstitium Absent GUDMAP:12531
TS23: renal cortex Present GUDMAP:12531
TS23: metanephros Present GUDMAP:12531
TS23: urinary system Present GUDMAP:12531
TS23: cortical renal tubule Present Regionally restricted GUDMAP:12531 A subset of tubules within the cortex show no expression.
TS23: anlage of loop of Henle of cortical renal tubule Present GUDMAP:12531
TS23: developing capillary loop stage nephron group Present GUDMAP:12531
TS23: maturing nephron Present GUDMAP:12531
TS23: late tubule Present GUDMAP:12531
TS23: renal medulla Present GUDMAP:12531
TS23: immature loop of Henle Present Regionally restricted GUDMAP:12531 A subset of immature loop of Henle show no expression. Possibly the ascending limb adjacent to the distal tubule.
TS23: capillary loop renal corpuscle Absent GUDMAP:12531
TS23: maturing renal corpuscle Absent GUDMAP:12531
TS23: cortical early proximal tubule Present GUDMAP:12531
TS23: cortical early distal tubule Ambiguous GUDMAP:12531
TS23: renal connecting tubule Absent GUDMAP:12531
TS23: proximal segment of s-shaped body Absent GUDMAP:12531
TS23: s-shaped body Present GUDMAP:12531
TS23: distal segment of s-shaped body Ambiguous GUDMAP:12531
TS23: renal connecting tubule of s-shaped body Absent GUDMAP:12531
TS23: medial segment of s-shaped body Present GUDMAP:12531
TS23: early tubule Present Regionally restricted GUDMAP:12531
TS23: ureteric trunk Absent GUDMAP:12531
TS23: ureter Absent GUDMAP:12531
TS23: cortical renal tubule of capillary loop nephron group Present GUDMAP:12531
TS23: early proximal tubule of capillary loop nephron Present GUDMAP:12531
TS23: early proximal tubule of maturing nephron Present GUDMAP:12531 Expression detected in S1, S2 and S3 segments of early proximal tubule of maturing nephrons.
TS23: cortical renal tubule of maturing nephron group Present GUDMAP:12531
TS23: early distal tubule of capillary loop nephron Ambiguous GUDMAP:12531
TS23: early distal tubule of maturing nephron Ambiguous GUDMAP:12531
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory