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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541692
Gene symbol: Prrx1
Gene name: paired related homeobox 1
Probe: RIKEN clone 4632419J16 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:12553: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: ureteral smooth muscle layer Absent GUDMAP:12553
TS23: ureteral mesenchyme Present GUDMAP:12553
TS23: ureter Present Regionally restricted GUDMAP:12553 Specific expression in the ureter, restricted to the outer layer (future adventitia).
TS23: renal pelvis Present GUDMAP:12553
TS23: pelvic smooth muscle Present GUDMAP:12553
TS23: perihilar interstitium Present GUDMAP:12553
TS23: renal medulla Present GUDMAP:12553
TS23: renal cortex Present GUDMAP:12553
TS23: metanephros Present GUDMAP:12553
TS23: urinary system Present GUDMAP:12553
TS23: pelvic urothelial lining Absent GUDMAP:12553
TS23: nephrogenic zone Absent GUDMAP:12553
TS23: nephrogenic interstitium Absent GUDMAP:12553
TS23: cap mesenchyme Absent GUDMAP:12553
TS23: pretubular aggregate Absent GUDMAP:12553
TS23: ureteric tip Absent GUDMAP:12553
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:12553
TS23: collecting duct Absent GUDMAP:12553
TS23: early nephron Absent GUDMAP:12553
TS23: ureteric trunk Absent GUDMAP:12553
TS23: renal vesicle Absent GUDMAP:12553
TS23: comma-shaped body Absent GUDMAP:12553
TS23: s-shaped body Absent GUDMAP:12553
TS23: capillary loop renal corpuscle Absent GUDMAP:12553
TS23: maturing renal corpuscle Absent GUDMAP:12553
TS23: cortical renal tubule Absent GUDMAP:12553
TS23: cortical collecting duct Absent GUDMAP:12553
TS23: renal cortical vasculature Absent GUDMAP:12553
TS23: early tubule Absent GUDMAP:12553
TS23: developing capillary loop stage nephron group Absent GUDMAP:12553
TS23: maturing nephron Absent GUDMAP:12553
TS23: late tubule Absent GUDMAP:12553
TS23: urothelium of ureter Absent GUDMAP:12553
TS23: renal cortical interstitium Present Regionally restricted GUDMAP:12553 The strongest expression in renal cortical interstitium is detected closest to the renal medulla.
TS23: renal medullary interstitium Present GUDMAP:12553
TS23: immature loop of Henle Absent GUDMAP:12553
TS23: medullary collecting duct Absent GUDMAP:12553
TS23: renal medullary vasculature Absent GUDMAP:12553
TS23: renal interstitium Present GUDMAP:12553
TS23: ureteral mesenchyme subepithelial layer Absent GUDMAP:12553
TS23: ureteral smooth muscle layer smooth muscle component Absent GUDMAP:12553
TS23: ureteral smooth muscle layer interstitium Absent GUDMAP:12553
TS23: ureteral mesenchyme outer layer Present GUDMAP:12553
Specimen GUDMAP:12554: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: ureteral smooth muscle layer Absent GUDMAP:12554
TS23: ureteral mesenchyme Present GUDMAP:12554
TS23: ureter Present Regionally restricted GUDMAP:12554 Specific expression in the ureter, restricted to the outer layer (future adventitia).
TS23: urinary system Present GUDMAP:12554
TS23: urothelium of ureter Absent GUDMAP:12554
TS23: ureteral mesenchyme subepithelial layer Absent GUDMAP:12554
TS23: ureteral smooth muscle layer smooth muscle component Absent GUDMAP:12554
TS23: ureteral smooth muscle layer interstitium Absent GUDMAP:12554
TS23: ureteral mesenchyme outer layer Present GUDMAP:12554
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
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