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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541574
Gene symbol: Pipox
Gene name: pipecolic acid oxidase
Probe: RIKEN clone 2010309K08 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:10786: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: urinary system Present GUDMAP:10786
TS23: metanephros Present Regionally restricted GUDMAP:10786
TS23: renal cortex Present Regionally restricted GUDMAP:10786
TS23: cortical renal tubule Present Regionally restricted GUDMAP:10786
TS23: cortical early proximal tubule Present Graded GUDMAP:10786 strongest expression in early proximal tubule of maturing nephrons extending close to the medulla (early S3 segment of proximal tubule) and weaker expression in early S1 segment adjacent to renal corpuscle
TS23: renal medulla Present Regionally restricted GUDMAP:10786
TS23: immature loop of Henle Present Regionally restricted GUDMAP:10786 regional expression in a subset of tubules
TS23: straight limb of immature loop of Henle Present GUDMAP:10786
TS23: renal capsule Absent GUDMAP:10786
TS23: nephrogenic zone Absent GUDMAP:10786
TS23: renal vesicle Absent GUDMAP:10786
TS23: comma-shaped body Absent GUDMAP:10786
TS23: s-shaped body Absent GUDMAP:10786
TS23: capillary loop renal corpuscle Absent GUDMAP:10786
TS23: maturing renal corpuscle Absent GUDMAP:10786
TS23: renal connecting tubule Absent GUDMAP:10786
TS23: cortical collecting duct Absent GUDMAP:10786
TS23: renal cortical interstitium Absent GUDMAP:10786
TS23: renal cortical vasculature Absent GUDMAP:10786
TS23: renal medullary interstitium Absent GUDMAP:10786
TS23: renal medullary vasculature Absent GUDMAP:10786
TS23: medullary collecting duct Absent GUDMAP:10786
TS23: renal pelvis Absent GUDMAP:10786
TS23: anlage of loop of Henle of cortical renal tubule Ambiguous GUDMAP:10786
TS23: cortical renal tubule of maturing nephron group Present Regionally restricted GUDMAP:10786
TS23: early proximal tubule of maturing nephron Present Graded GUDMAP:10786 strongest expression in early proximal tubule extending close to the medulla (early S3 segment of proximal tubule) and weaker expression in early S1 segment adjacent to renal corpuscle
TS23: cortical renal tubule of capillary loop nephron group Present Regionally restricted GUDMAP:10786 likely weaker expression in subset of tubules of capillary loop stage nephrons which may include early proximal tubule and/or anlage of loop of Henle
TS23: early proximal tubule of capillary loop nephron Ambiguous GUDMAP:10786

Specimen GUDMAP:10787: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: ureter Absent GUDMAP:10787

Specimen GUDMAP:10788: postnatal adult (more )
Note: This animal was sexually mature. Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS28: urinary system Present GUDMAP:10788
TS28: metanephros Present Regionally restricted GUDMAP:10788
TS28: renal cortex Present Regionally restricted GUDMAP:10788
TS28: cortical renal tubule Present Regionally restricted GUDMAP:10788
TS28: renal proximal tubule Present Regionally restricted GUDMAP:10788
TS28: proximal straight tubule, cortical portion Present GUDMAP:10788
TS28: renal medulla Present Regionally restricted GUDMAP:10788
TS28: outer renal medulla Present Regionally restricted GUDMAP:10788
TS28: outer stripe of outer medulla Present Regionally restricted GUDMAP:10788
TS28: loop of Henle of outer stripe of outer medulla Present GUDMAP:10788
TS28: proximal straight tubule of outer stripe of outer medulla Present GUDMAP:10788
TS28: mature renal corpuscle Absent GUDMAP:10788
TS28: renal proximal convoluted tubule Absent GUDMAP:10788
TS28: renal distal tubule Absent GUDMAP:10788
TS28: renal connecting tubule Absent GUDMAP:10788
TS28: cortical collecting duct Absent GUDMAP:10788
TS28: renal cortical interstitium Absent GUDMAP:10788
TS28: renal cortical vasculature Absent GUDMAP:10788
TS28: distal straight tubule of outer stripe of outer medulla Absent GUDMAP:10788
TS28: inner stripe of outer medulla Absent GUDMAP:10788
TS28: outer medullary collecting duct Absent GUDMAP:10788
TS28: outer medullary interstitium Absent GUDMAP:10788
TS28: inner renal medulla Absent GUDMAP:10788
TS28: renal medullary vasculature Absent GUDMAP:10788
TS28: renal pelvis Absent GUDMAP:10788


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory