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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541525
Gene symbol: Lhx1
Gene name: LIM homeobox protein 1
Probe: RIKEN clone C230045C03 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:13416: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: urinary system Present GUDMAP:13416
TS23: metanephros Present GUDMAP:13416
TS23: nephrogenic zone Present GUDMAP:13416
TS23: pretubular aggregate Present GUDMAP:13416
TS23: renal cortex Present GUDMAP:13416
TS23: renal vesicle Present GUDMAP:13416
TS23: comma-shaped body Present GUDMAP:13416
TS23: s-shaped body Present GUDMAP:13416
TS23: ureteric tip Present GUDMAP:13416 Strongest expression which appears within the ureteric tip is likely to be expression in the connecting segment of nephrons, however some ureteric tips show very weak expression.
TS23: cortical renal tubule Present GUDMAP:13416 Weak expression in cortical renal tubules of stage III capillary loop nephrons only.
TS23: cortical renal tubule of capillary loop nephron group Present GUDMAP:13416
TS23: renal connecting segment of renal vesicle Present GUDMAP:13416
TS23: distal renal vesicle Present GUDMAP:13416
TS23: upper limb of comma-shaped body Present GUDMAP:13416
TS23: renal connecting segment of comma-shaped body Present GUDMAP:13416
TS23: renal connecting tubule of s-shaped body Present GUDMAP:13416
TS23: distal segment of s-shaped body Present GUDMAP:13416
TS23: medial segment of s-shaped body Present GUDMAP:13416
TS23: nephrogenic interstitium Absent GUDMAP:13416
TS23: cap mesenchyme Absent GUDMAP:13416
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:13416
TS23: proximal segment of s-shaped body Ambiguous GUDMAP:13416 A small subregion of the proximal segment of the s-shaped body adjacent to the medial segment may show some expression.
TS23: capillary loop renal corpuscle Absent GUDMAP:13416
TS23: maturing renal corpuscle Absent GUDMAP:13416
TS23: cortical collecting duct Absent GUDMAP:13416
TS23: renal cortical interstitium Absent GUDMAP:13416
TS23: renal cortical vasculature Absent GUDMAP:13416
TS23: renal medulla Absent GUDMAP:13416
TS23: renal pelvis Absent GUDMAP:13416
TS23: early tubule Present GUDMAP:13416
TS23: developing capillary loop stage nephron group Present GUDMAP:13416
TS23: late tubule Present GUDMAP:13416
TS23: early nephron Present GUDMAP:13416
TS23: ureteric trunk Absent GUDMAP:13416
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory