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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541448
Gene symbol: Foxa1
Gene name: forkhead box A1
Probe: UQ2735Foxa1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:12528: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: renal cortex Absent GUDMAP:12528
TS23: nephrogenic zone Absent GUDMAP:12528
TS23: renal medullary interstitium Absent GUDMAP:12528
TS23: renal medullary vasculature Absent GUDMAP:12528
TS23: pelvic smooth muscle Absent GUDMAP:12528
TS23: perihilar interstitium Absent GUDMAP:12528
TS23: early nephron Absent GUDMAP:12528
TS23: renal interstitium Absent GUDMAP:12528
TS23: ureteral mesenchyme Absent GUDMAP:12528
TS23: ureteral vasculature Absent GUDMAP:12528
TS23: renal medulla Present GUDMAP:12528
TS23: medullary collecting duct Present GUDMAP:12528
TS23: pelvic urothelial lining Present GUDMAP:12528
TS23: renal pelvis Present GUDMAP:12528
TS23: collecting duct Present GUDMAP:12528
TS23: ureteric trunk Present GUDMAP:12528
TS23: immature loop of Henle Ambiguous GUDMAP:12528
TS23: ureteric tip Absent GUDMAP:12528
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:12528
TS23: cortical collecting duct Absent GUDMAP:12528
TS23: nephrogenic interstitium Absent GUDMAP:12528
TS23: cap mesenchyme Absent GUDMAP:12528
TS23: pretubular aggregate Absent GUDMAP:12528
TS23: renal vesicle Absent GUDMAP:12528
TS23: comma-shaped body Absent GUDMAP:12528
TS23: s-shaped body Absent GUDMAP:12528
TS23: capillary loop renal corpuscle Absent GUDMAP:12528
TS23: maturing renal corpuscle Absent GUDMAP:12528
TS23: cortical renal tubule Absent GUDMAP:12528
TS23: renal cortical interstitium Absent GUDMAP:12528
TS23: renal cortical vasculature Absent GUDMAP:12528
TS23: early tubule Absent GUDMAP:12528
TS23: developing capillary loop stage nephron group Absent GUDMAP:12528
TS23: maturing nephron Absent GUDMAP:12528
TS23: urothelium of ureter Present GUDMAP:12528
TS23: ureter Present GUDMAP:12528
TS23: metanephros Present GUDMAP:12528
TS23: urinary system Present GUDMAP:12528
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory