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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5540898
Gene symbol: C1qtnf3
Gene name: C1q and tumor necrosis factor related protein 3
Probe: RIKEN clone 2310005P21 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:9114: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: urinary system Present Regionally restricted GUDMAP:9114
TS23: metanephros Present Regionally restricted GUDMAP:9114
TS23: nephrogenic zone Present Regionally restricted GUDMAP:9114
TS23: nephrogenic interstitium Present Regionally restricted GUDMAP:9114 expression detected in a subset of cells in the nephrogenic interstitium adjacent to the renal capsule
TS23: cortical renal tubule Present GUDMAP:9114 expression detected in tubular structure in cortex which may be cortical renal tubule of maturing nephron not of developing capillary loop nephron
TS23: maturing nephron Present GUDMAP:9114
TS23: renal interstitium Present Regionally restricted GUDMAP:9114
TS23: cap mesenchyme Absent GUDMAP:9114
TS23: pretubular aggregate Absent GUDMAP:9114
TS23: ureteric tip Absent GUDMAP:9114
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:9114
TS23: renal vesicle Absent GUDMAP:9114
TS23: comma-shaped body Absent GUDMAP:9114
TS23: upper limb of comma-shaped body Absent GUDMAP:9114
TS23: lower limb of comma-shaped body Absent GUDMAP:9114
TS23: s-shaped body Absent GUDMAP:9114
TS23: renal connecting tubule of s-shaped body Absent GUDMAP:9114
TS23: distal segment of s-shaped body Absent GUDMAP:9114
TS23: medial segment of s-shaped body Absent GUDMAP:9114
TS23: proximal segment of s-shaped body Absent GUDMAP:9114
TS23: visceral epithelium of s-shaped body Absent GUDMAP:9114
TS23: parietal epithelium of s-shaped body Absent GUDMAP:9114
TS23: capillary loop renal corpuscle Absent GUDMAP:9114
TS23: visceral epithelium of capillary loop renal corpuscle Absent GUDMAP:9114
TS23: parietal epithelium of capillary loop renal corpuscle Absent GUDMAP:9114
TS23: presumptive mesangium of capillary loop renal corpuscle Absent GUDMAP:9114
TS23: presumptive endothelium of capillary loop renal corpuscle Absent GUDMAP:9114
TS23: associated interstitium of capillary loop renal corpuscle Absent GUDMAP:9114
TS23: maturing renal corpuscle Absent GUDMAP:9114
TS23: maturing glomerular tuft Absent GUDMAP:9114
TS23: glomerular capillary system of maturing glomerular tuft Absent GUDMAP:9114
TS23: glomerular basement membrane of maturing renal corpuscle Absent GUDMAP:9114
TS23: glomerular mesangium of maturing glomerular tuft Absent GUDMAP:9114
TS23: visceral epithelium of maturing renal corpuscle Absent GUDMAP:9114
TS23: Bowman's capsule of maturing renal corpuscle Absent GUDMAP:9114
TS23: parietal epithelium of maturing renal corpuscle Absent GUDMAP:9114
TS23: glomerular mesangium of maturing renal corpuscle Absent GUDMAP:9114
TS23: juxtaglomerular arteriole Absent GUDMAP:9114
TS23: cortical collecting duct Absent GUDMAP:9114
TS23: renal cortical interstitium Absent GUDMAP:9114
TS23: renal cortical vasculature Absent GUDMAP:9114
TS23: renal cortical arterial system Absent GUDMAP:9114
TS23: renal cortical venous system Absent GUDMAP:9114
TS23: renal cortical capillary Absent GUDMAP:9114
TS23: renal medulla Absent GUDMAP:9114
TS23: immature loop of Henle Absent GUDMAP:9114
TS23: straight limb of immature loop of Henle Absent GUDMAP:9114
TS23: bend of immature loop of Henle Absent GUDMAP:9114
TS23: renal medullary interstitium Absent GUDMAP:9114
TS23: renal medullary vasculature Absent GUDMAP:9114
TS23: renal medullary arterial system Absent GUDMAP:9114
TS23: renal medullary venous system Absent GUDMAP:9114
TS23: renal medullary capillary Absent GUDMAP:9114
TS23: medullary collecting duct Absent GUDMAP:9114
TS23: renal calyx Absent GUDMAP:9114
TS23: renal pelvis Absent GUDMAP:9114
TS23: pelvic urothelial lining Absent GUDMAP:9114
TS23: pelvic smooth muscle Absent GUDMAP:9114
TS23: perihilar interstitium Absent GUDMAP:9114
TS23: developing capillary loop stage nephron group Absent GUDMAP:9114
TS23: collecting duct Absent GUDMAP:9114
TS23: renal vasculature Absent GUDMAP:9114
TS23: early nephron Absent GUDMAP:9114
TS23: cortical renal tubule of maturing nephron group Present GUDMAP:9114
TS23: cortical renal tubule of capillary loop nephron group Absent GUDMAP:9114
Specimen GUDMAP:9115: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: ureter Absent GUDMAP:9115
TS23: urothelium of ureter Absent GUDMAP:9115
TS23: ureteral mesenchyme Absent GUDMAP:9115
TS23: ureteral mesenchyme subepithelial layer Absent GUDMAP:9115
TS23: ureteral smooth muscle layer Absent GUDMAP:9115
Specimen GUDMAP:14121: postnatal adult (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS28: renal medulla Present GUDMAP:14121
TS28: outer renal medulla Present GUDMAP:14121
TS28: outer stripe of outer medulla Present GUDMAP:14121
TS28: loop of Henle of outer stripe of outer medulla Present GUDMAP:14121
TS28: proximal straight tubule of outer stripe of outer medulla Present Regionally restricted GUDMAP:14121 distal expression
TS28: loop of Henle, outer medullary portion Present GUDMAP:14121
TS28: proximal straight tubule, outer medullary portion Present Regionally restricted GUDMAP:14121 distal expression
TS28: thin descending limb of outer medulla Absent GUDMAP:14121
TS28: thin ascending limb of outer medulla Absent GUDMAP:14121
TS28: premacula segment of distal straight tubule of outer medulla Absent GUDMAP:14121
TS28: outer medullary interstitium Absent GUDMAP:14121
TS28: distal straight tubule of outer stripe of outer medulla Absent GUDMAP:14121
TS28: inner stripe of outer medulla Absent GUDMAP:14121
TS28: outer medullary collecting duct Absent GUDMAP:14121
TS28: loop of Henle of inner stripe of outer medulla Absent GUDMAP:14121
TS28: thin descending limb of inner stripe of outer medulla Absent GUDMAP:14121
TS28: premacula segment of distal straight tubule of inner stripe of inner medulla Absent GUDMAP:14121
TS28: inner renal medulla Absent GUDMAP:14121
TS28: renal pelvis Absent GUDMAP:14121
TS28: renal cortex Absent GUDMAP:14121
TS28: mature renal corpuscle Absent GUDMAP:14121
TS28: cortical renal tubule Absent GUDMAP:14121
TS28: cortical collecting duct Absent GUDMAP:14121
TS28: renal cortical interstitium Absent GUDMAP:14121
TS28: renal proximal tubule Absent GUDMAP:14121
TS28: renal distal tubule Absent GUDMAP:14121
TS28: renal connecting tubule Absent GUDMAP:14121
TS28: renal proximal convoluted tubule Absent GUDMAP:14121
TS28: proximal straight tubule, cortical portion Absent GUDMAP:14121
TS28: metanephros Present Regionally restricted GUDMAP:14121 Marker of the distal portion of the proximal straight tubule, within the outer stripe of the outer medulla.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/30/2024
MGI 6.23 		The Jackson Laboratory