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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5540884
Gene symbol: Upk3a
Gene name: uroplakin 3A
Probe: RIKEN clone 1110017C07 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:9904: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: urinary system Present GUDMAP:9904
TS23: metanephros Present Regionally restricted GUDMAP:9904
TS23: renal medulla Present Regionally restricted GUDMAP:9904
TS23: medullary collecting duct Present GUDMAP:9904 expression is specific to medullary collecting duct. All other signal is likely to be background.
TS23: renal pelvis Present Regionally restricted GUDMAP:9904
TS23: pelvic urothelial lining Present GUDMAP:9904 expression is detected in the pelvic urothelial lining and the urothelium. Other expression is likely to be background.
TS23: collecting duct Present GUDMAP:9904
TS23: nephrogenic zone Absent GUDMAP:9904
TS23: renal cortex Absent GUDMAP:9904
TS23: immature loop of Henle Absent GUDMAP:9904
TS23: renal medullary vasculature Absent GUDMAP:9904
TS23: pelvic smooth muscle Absent GUDMAP:9904
TS23: perihilar interstitium Absent GUDMAP:9904
TS23: developing capillary loop stage nephron group Absent GUDMAP:9904
TS23: maturing nephron Absent GUDMAP:9904
TS23: renal interstitium Absent GUDMAP:9904
TS23: renal vasculature Absent GUDMAP:9904
TS23: early nephron Absent GUDMAP:9904
TS23: late tubule Absent GUDMAP:9904

Specimen GUDMAP:9905: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: ureter Present GUDMAP:9905
TS23: urothelium of ureter Present GUDMAP:9905
TS23: ureteral mesenchyme Absent GUDMAP:9905

Specimen GUDMAP:10025: embryonic day 10.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS17: genitourinary system Ambiguous GUDMAP:10025 expression uncertain

Specimen GUDMAP:10390: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: male reproductive system Present GUDMAP:10390
TS21: testis Present Regionally restricted GUDMAP:10390
TS21: primary sex cord Present GUDMAP:10390
TS21: coelomic epithelium of testis Absent GUDMAP:10390
TS21: interstitium of the testis Absent GUDMAP:10390
TS21: mesonephric tubule of male Absent GUDMAP:10390
TS21: nephric duct of male, mesonephric portion Absent GUDMAP:10390
TS21: nephric duct of male, rest of Absent GUDMAP:10390
TS21: paramesonephric duct of male, rest of Absent GUDMAP:10390
TS21: coelomic epithelium of male mesonephros Absent GUDMAP:10390
TS21: mesonephric mesenchyme of male Ambiguous GUDMAP:10390 uncertain expression
TS21: paramesonephric duct of male, mesonephric portion Ambiguous GUDMAP:10390 possible expression

Specimen GUDMAP:10391: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: mesonephric tubule of female Absent GUDMAP:10391
TS21: nephric duct of female, mesonephric portion Absent GUDMAP:10391
TS21: paramesonephric duct of female, mesonephric portion Absent GUDMAP:10391
TS21: nephric duct of female, rest of Absent GUDMAP:10391
TS21: paramesonephric duct of female, rest of Absent GUDMAP:10391
TS21: coelomic epithelium of female mesonephros Absent GUDMAP:10391
TS21: mesonephric mesenchyme of female Ambiguous GUDMAP:10391 uncertain expression
TS21: ovary Ambiguous GUDMAP:10391 uncertain expression

Specimen GUDMAP:10392: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the female is shown. Annotators reported the male expression pattern in the metanephros is identical to female.
Structure Level Pattern Image Note
TS21: ureter Absent GUDMAP:10392
TS21: metanephros Ambiguous GUDMAP:10392 uncertain expression

Specimen GUDMAP:10393: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the female is shown. Annotators reported the male expression pattern in the urogenital sinus is identical to female.
Structure Level Pattern Image Note
TS21: urinary system Present GUDMAP:10393
TS21: urogenital sinus Present GUDMAP:10393
TS21: primitive bladder Present GUDMAP:10393
TS21: urothelium of primitive bladder Present GUDMAP:10393
TS21: ureter Absent GUDMAP:10393

Specimen GUDMAP:13627: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: urothelium of ventral bladder neck Present GUDMAP:13627
TS23: urothelium of bladder fundus Present GUDMAP:13627
TS23: urothelium of bladder Present GUDMAP:13627
TS23: urinary system Present GUDMAP:13627
TS23: lamina propria of bladder Absent GUDMAP:13627
TS23: detrusor muscle of bladder Absent GUDMAP:13627
TS23: serosa of bladder Absent GUDMAP:13627
TS23: adventitia of bladder Absent GUDMAP:13627
TS23: vasculature of bladder Absent GUDMAP:13627
TS23: bladder Present GUDMAP:13627
TS23: urethra of male Present GUDMAP:13627 Pelvic urethra was not examined as it was not present in the tissue sections.
TS23: phallic urethra of male Present GUDMAP:13627
TS23: urethral plate epithelium of male Present GUDMAP:13627

Specimen GUDMAP:13628: postnatal day 2 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS27: urothelium of ureter Present GUDMAP:13628
TS27: bladder Present GUDMAP:13628
TS27: urothelium of bladder Present GUDMAP:13628
TS27: ureter Present GUDMAP:13628
TS27: urinary system Present GUDMAP:13628
TS27: nerve of bladder Absent GUDMAP:13628
TS27: vasculature of bladder Absent GUDMAP:13628
TS27: adventitia of bladder Absent GUDMAP:13628
TS27: serosa of bladder Absent GUDMAP:13628
TS27: detrusor muscle of bladder Absent GUDMAP:13628
TS27: lamina propria of bladder Absent GUDMAP:13628
TS27: ureteral vasculature Absent GUDMAP:13628
TS27: adventitia of ureter Absent GUDMAP:13628
TS27: ureteral smooth muscle layer Absent GUDMAP:13628
TS27: lamina propria of ureter Absent GUDMAP:13628

Specimen GUDMAP:13631: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: male reproductive system Present GUDMAP:13631
TS23: genital tubercle of male Present GUDMAP:13631
TS23: epithelium of phallic urethra of male Present GUDMAP:13631 The distal urethral epithelium was not examined as it was not present in the tissue sections.
TS23: urethral tube epithelium of male Present GUDMAP:13631
TS23: male external genitalia Present GUDMAP:13631
TS23: urethra of male Present GUDMAP:13631 Pelvic urethra was not examined as it was not present in the tissue sections.
TS23: phallic urethra of male Present GUDMAP:13631
TS23: urethral plate epithelium of male Present GUDMAP:13631
TS23: skin of glans of male genital tubercle Absent GUDMAP:13631
TS23: mesenchyme of glans of male genital tubercle Absent GUDMAP:13631
TS23: glans of male genital tubercle Absent GUDMAP:13631
TS23: preputial swelling of male Absent GUDMAP:13631
TS23: skin of male preputial swelling Absent GUDMAP:13631
TS23: mesenchyme of male preputial swelling Absent GUDMAP:13631
TS23: developing vasculature of male genital tubercle Absent GUDMAP:13631
TS23: scrotal swelling Absent GUDMAP:13631
TS23: scrotal swelling skin Absent GUDMAP:13631
TS23: mesenchyme of scrotal swelling Absent GUDMAP:13631


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory