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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5540857
Gene symbol: Egr1
Gene name: early growth response 1
Probe: RIKEN clone A530045N19 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:9803: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: male reproductive system Present Regionally restricted GUDMAP:9803
TS21: mesonephros of male Present Regionally restricted GUDMAP:9803 spotted expression
TS21: nephric duct of male, mesonephric portion Present GUDMAP:9803
TS21: paramesonephric duct of male, mesonephric portion Present Spotted GUDMAP:9803
TS21: nephric duct of male, rest of Present Spotted GUDMAP:9803
TS21: paramesonephric duct of male, rest of Present Spotted GUDMAP:9803
TS21: testis Present Regionally restricted GUDMAP:9803 spotted expression
TS21: primary sex cord Present GUDMAP:9803
TS21: mesonephric mesenchyme of male Ambiguous GUDMAP:9803 possible expression
TS21: mesonephric tubule of male Ambiguous GUDMAP:9803 uncertain expression
TS21: rete testis Ambiguous GUDMAP:9803 uncertain expression

Specimen GUDMAP:9804: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the male is shown. Annotators reported the male expression pattern in the metanephros is identical to female.
Structure Level Pattern Image Note
TS21: urinary system Present Regionally restricted GUDMAP:9804 spotted expression
TS21: metanephros Present Spotted GUDMAP:9804

Specimen GUDMAP:9805: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the male is shown. Annotators reported the male expression pattern in the urogenital sinus is identical to female.
Structure Level Pattern Image Note
TS21: urinary system Present Regionally restricted GUDMAP:9805 spotted expression
TS21: urogenital sinus Present Regionally restricted GUDMAP:9805 spotted expression; a speckled staining can be observed at the surface of urogenital sinus
TS21: primitive bladder Present GUDMAP:9805

Specimen GUDMAP:9806: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: female reproductive system Present Regionally restricted GUDMAP:9806 spotted expression
TS21: mesonephros of female Present Regionally restricted GUDMAP:9806 spotted expression
TS21: ovary Present Spotted GUDMAP:9806

Specimen GUDMAP:9983: embryonic day 10.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS17: genitourinary system Present Spotted GUDMAP:9983

Specimen GUDMAP:11301: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: urinary system Present GUDMAP:11301
TS23: metanephros Present Regionally restricted GUDMAP:11301 spotted expression
TS23: nephrogenic zone Present Regionally restricted GUDMAP:11301
TS23: nephrogenic interstitium Present Regionally restricted GUDMAP:11301 strong expression detected in a subset of cells in the nephrogenic interstitium
TS23: ureteric tip Present Regionally restricted GUDMAP:11301 possible expression in some ureteric tips but difficult to determine because such strong expression in surrounding interstitium.
TS23: renal cortex Present GUDMAP:11301
TS23: renal cortical interstitium Present Regionally restricted GUDMAP:11301
TS23: renal medulla Present GUDMAP:11301
TS23: immature loop of Henle Present GUDMAP:11301
TS23: renal medullary interstitium Present Regionally restricted GUDMAP:11301
TS23: developing capillary loop stage nephron group Present GUDMAP:11301
TS23: maturing nephron Present GUDMAP:11301
TS23: collecting duct Present GUDMAP:11301
TS23: renal interstitium Present GUDMAP:11301
TS23: capillary loop renal corpuscle Present GUDMAP:11301
TS23: presumptive mesangium of capillary loop renal corpuscle Present GUDMAP:11301
TS23: presumptive endothelium of capillary loop renal corpuscle Present GUDMAP:11301
TS23: renal cortical vasculature Present GUDMAP:11301
TS23: renal medullary vasculature Present GUDMAP:11301
TS23: renal medullary capillary Present GUDMAP:11301
TS23: cap mesenchyme Absent GUDMAP:11301
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:11301
TS23: renal vesicle Absent GUDMAP:11301 expression detected in some renal vesicles
TS23: comma-shaped body Absent GUDMAP:11301
TS23: s-shaped body Absent GUDMAP:11301
TS23: cortical collecting duct Absent GUDMAP:11301
TS23: cortical renal tubule Absent GUDMAP:11301
TS23: medullary collecting duct Absent GUDMAP:11301
TS23: renal pelvis Absent GUDMAP:11301
TS23: pelvic urothelial lining Absent GUDMAP:11301
TS23: pelvic smooth muscle Absent GUDMAP:11301
TS23: perihilar interstitium Absent GUDMAP:11301
TS23: renal vasculature Absent GUDMAP:11301
TS23: early nephron Absent GUDMAP:11301
TS23: maturing renal corpuscle Absent GUDMAP:11301
TS23: visceral epithelium of capillary loop renal corpuscle Absent GUDMAP:11301
TS23: parietal epithelium of capillary loop renal corpuscle Absent GUDMAP:11301
TS23: pretubular aggregate Ambiguous GUDMAP:11301
TS23: renal cortical capillary Ambiguous GUDMAP:11301

Specimen GUDMAP:11302: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: ureter Absent GUDMAP:11302
TS23: urothelium of ureter Absent GUDMAP:11302
TS23: ureteral mesenchyme Absent GUDMAP:11302
TS23: ureteral mesenchyme subepithelial layer Absent GUDMAP:11302
TS23: ureteral smooth muscle layer Absent GUDMAP:11302
TS23: ureteral smooth muscle layer smooth muscle component Absent GUDMAP:11302
TS23: ureteral smooth muscle layer interstitium Absent GUDMAP:11302
TS23: ureteral mesenchyme outer layer Absent GUDMAP:11302
TS23: ureteral vasculature Ambiguous GUDMAP:11302


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory