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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5540846
Gene symbol: Col18a1
Gene name: collagen, type XVIII, alpha 1
Probe: RIKEN clone 3200001M10 subclone 1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:7046: postnatal adult (more )
Note: Labeling was visualized using NBT/BCIP. Annotators reported some non-specific nuclear staining.
Structure Level Pattern Image Note
TS28: renal cortex Present GUDMAP:7046
TS28: mature renal corpuscle Present GUDMAP:7046
TS28: Bowman's capsule of mature renal corpuscle Present GUDMAP:7046
TS28: parietal epithelium of mature renal corpuscle Present GUDMAP:7046
TS28: renal distal tubule Present GUDMAP:7046
TS28: cortical collecting duct Present GUDMAP:7046
TS28: renal medulla Present GUDMAP:7046
TS28: outer renal medulla Present GUDMAP:7046
TS28: outer stripe of outer medulla Present GUDMAP:7046
TS28: distal straight tubule of outer stripe of outer medulla Present GUDMAP:7046
TS28: outer medullary collecting duct Present GUDMAP:7046
TS28: inner stripe of outer medulla Present GUDMAP:7046
TS28: premacula segment of distal straight tubule of inner stripe of inner medulla Present GUDMAP:7046
TS28: inner renal medulla Present GUDMAP:7046
TS28: inner medullary collecting duct Present GUDMAP:7046

Specimen GUDMAP:7047: embryonic day 15.5 (more )
Note: Labeling was visualized using NBT/BCIP. Annotators reported there is a moderate amount of background staining.
Structure Level Pattern Image Note
TS23: metanephros Present GUDMAP:7047
TS23: nephrogenic zone Present GUDMAP:7047
TS23: ureteric tip Present GUDMAP:7047
TS23: renal cortex Present GUDMAP:7047
TS23: capillary loop renal corpuscle Present GUDMAP:7047
TS23: visceral epithelium of capillary loop renal corpuscle Present GUDMAP:7047
TS23: parietal epithelium of capillary loop renal corpuscle Present GUDMAP:7047
TS23: maturing renal corpuscle Present GUDMAP:7047
TS23: maturing glomerular tuft Present GUDMAP:7047
TS23: visceral epithelium of maturing renal corpuscle Present GUDMAP:7047
TS23: Bowman's capsule of maturing renal corpuscle Present GUDMAP:7047
TS23: parietal epithelium of maturing renal corpuscle Present GUDMAP:7047
TS23: cortical renal tubule Present GUDMAP:7047
TS23: cortical collecting duct Present GUDMAP:7047
TS23: renal medulla Present GUDMAP:7047
TS23: immature loop of Henle Present GUDMAP:7047
TS23: medullary collecting duct Present GUDMAP:7047
TS23: renal pelvis Present GUDMAP:7047
TS23: pelvic urothelial lining Present GUDMAP:7047

Specimen GUDMAP:7270: embryonic day 12.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS20: urinary system Present GUDMAP:7270
TS20: metanephros Present GUDMAP:7270
TS20: primitive collecting duct Present GUDMAP:7270
TS20: ureteric tip Present GUDMAP:7270
TS20: ureteric trunk Present GUDMAP:7270

Specimen GUDMAP:7271: embryonic day 10.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS17: genitourinary system Absent GUDMAP:7271 any staining seen is background

Specimen GUDMAP:7272: embryonic day 12.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS20: male reproductive system Present GUDMAP:7272
TS20: testis Present GUDMAP:7272
TS20: mesonephros of male Present GUDMAP:7272
TS20: mesonephric tubule of male Present GUDMAP:7272 cranial and caudal tubules show signal
TS20: nephric duct of male, mesonephric portion Present GUDMAP:7272
TS20: paramesonephric duct of male, mesonephric portion Present GUDMAP:7272
TS20: primary sex cord Present GUDMAP:7272 strongest signal in the primary sex cord but there may be weak signal in other regions of the testis
TS20: nephric duct, metanephric portion Present GUDMAP:7272
TS20: mesonephric mesenchyme of male Absent GUDMAP:7272

Specimen GUDMAP:8402: embryonic day 12.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS20: female reproductive system Present GUDMAP:8402
TS20: mesonephros of female Present GUDMAP:8402
TS20: mesonephric tubule of female Present GUDMAP:8402
TS20: cranial mesonephric tubule of female Present GUDMAP:8402
TS20: caudal mesonephric tubule of female Present GUDMAP:8402
TS20: nephric duct of female, mesonephric portion Present GUDMAP:8402
TS20: paramesonephric duct of female, mesonephric portion Present GUDMAP:8402
TS20: ovary Present GUDMAP:8402
TS20: mesenchymal stroma of ovary Present GUDMAP:8402


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory