Acaa1b RNA in situ Gene Expression Assay

Gene Expression Data
Assay Details

Assay

Reference:	J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type:	RNA in situ
MGI Accession ID:	MGI:5540840
Gene symbol:	Acaa1b
Gene name:	acetyl-Coenzyme A acyltransferase 1B

Probe:	RIKEN clone I530017M04 subclone
Probe preparation:	Antisense labelled with digoxigenin RNA
Visualized with:	Alkaline phosphatase

Results

GUDMAP:9040 ©

Specimen GUDMAP:9040: embryonic day 15.5 (more

)
Note: Labeling was visualized using BM purple.

Structure	Level	Pattern	Image	Note
TS23: urinary system	Present	Regionally restricted	GUDMAP:9040
TS23: metanephros	Present	Regionally restricted	GUDMAP:9040	strong to moderate expression in renal tubules of cortex and medulla; all other signal detected is likely to be background staining
TS23: renal cortex	Present	Regionally restricted	GUDMAP:9040
TS23: cortical renal tubule	Present		GUDMAP:9040
TS23: cortical early proximal tubule	Present		GUDMAP:9040
TS23: maturing nephron	Present	Regionally restricted	GUDMAP:9040
TS23: late tubule	Present		GUDMAP:9040
TS23: developing capillary loop stage nephron group	Present	Regionally restricted	GUDMAP:9040
TS23: anlage of loop of Henle of cortical renal tubule	Present		GUDMAP:9040
TS23: cortical early distal tubule	Present		GUDMAP:9040
TS23: renal medulla	Present	Regionally restricted	GUDMAP:9040
TS23: immature loop of Henle	Present		GUDMAP:9040
TS23: renal capsule	Absent		GUDMAP:9040
TS23: nephrogenic zone	Absent		GUDMAP:9040
TS23: nephrogenic interstitium	Absent		GUDMAP:9040
TS23: cap mesenchyme	Absent		GUDMAP:9040
TS23: pretubular aggregate	Absent		GUDMAP:9040
TS23: ureteric tip	Absent		GUDMAP:9040
TS23: ureteric tree terminal branch excluding tip itself	Absent		GUDMAP:9040
TS23: renal vesicle	Absent		GUDMAP:9040
TS23: comma-shaped body	Absent		GUDMAP:9040
TS23: upper limb of comma-shaped body	Absent		GUDMAP:9040
TS23: lower limb of comma-shaped body	Absent		GUDMAP:9040
TS23: renal connecting tubule of s-shaped body	Absent		GUDMAP:9040
TS23: distal segment of s-shaped body	Absent		GUDMAP:9040
TS23: medial segment of s-shaped body	Absent		GUDMAP:9040
TS23: parietal epithelium of s-shaped body	Absent		GUDMAP:9040
TS23: parietal epithelium of capillary loop renal corpuscle	Absent		GUDMAP:9040
TS23: presumptive mesangium of capillary loop renal corpuscle	Absent		GUDMAP:9040
TS23: presumptive endothelium of capillary loop renal corpuscle	Absent		GUDMAP:9040
TS23: associated interstitium of capillary loop renal corpuscle	Absent		GUDMAP:9040
TS23: glomerular capillary system of maturing glomerular tuft	Absent		GUDMAP:9040
TS23: glomerular basement membrane of maturing renal corpuscle	Absent		GUDMAP:9040
TS23: glomerular mesangium of maturing glomerular tuft	Absent		GUDMAP:9040
TS23: Bowman's capsule of maturing renal corpuscle	Absent		GUDMAP:9040
TS23: parietal epithelium of maturing renal corpuscle	Absent		GUDMAP:9040
TS23: glomerular mesangium of maturing renal corpuscle	Absent		GUDMAP:9040
TS23: juxtaglomerular arteriole	Absent		GUDMAP:9040
TS23: cortical collecting duct	Absent		GUDMAP:9040
TS23: renal cortical interstitium	Absent		GUDMAP:9040
TS23: renal cortical vasculature	Absent		GUDMAP:9040
TS23: renal cortical arterial system	Absent		GUDMAP:9040
TS23: renal cortical venous system	Absent		GUDMAP:9040
TS23: renal cortical capillary	Absent		GUDMAP:9040
TS23: renal connecting tubule	Absent		GUDMAP:9040
TS23: bend of immature loop of Henle	Absent		GUDMAP:9040
TS23: renal medullary interstitium	Absent		GUDMAP:9040
TS23: renal medullary vasculature	Absent		GUDMAP:9040
TS23: renal medullary arterial system	Absent		GUDMAP:9040
TS23: renal medullary venous system	Absent		GUDMAP:9040
TS23: renal medullary capillary	Absent		GUDMAP:9040
TS23: medullary collecting duct	Absent		GUDMAP:9040
TS23: renal calyx	Absent		GUDMAP:9040
TS23: pelvic smooth muscle	Absent		GUDMAP:9040
TS23: perihilar interstitium	Absent		GUDMAP:9040
TS23: collecting duct	Absent		GUDMAP:9040
TS23: renal interstitium	Absent		GUDMAP:9040
TS23: renal vasculature	Absent		GUDMAP:9040
TS23: early nephron	Absent		GUDMAP:9040
TS23: s-shaped body	Absent		GUDMAP:9040
TS23: proximal segment of s-shaped body	Absent		GUDMAP:9040
TS23: visceral epithelium of s-shaped body	Absent		GUDMAP:9040
TS23: maturing renal corpuscle	Absent		GUDMAP:9040
TS23: maturing glomerular tuft	Absent		GUDMAP:9040
TS23: visceral epithelium of maturing renal corpuscle	Absent		GUDMAP:9040
TS23: capillary loop renal corpuscle	Absent		GUDMAP:9040
TS23: visceral epithelium of capillary loop renal corpuscle	Absent		GUDMAP:9040
TS23: renal pelvis	Ambiguous		GUDMAP:9040
TS23: pelvic urothelial lining	Ambiguous		GUDMAP:9040
TS23: cortical renal tubule of maturing nephron group	Present		GUDMAP:9040
TS23: early proximal tubule of maturing nephron	Present		GUDMAP:9040
TS23: cortical renal tubule of capillary loop nephron group	Present		GUDMAP:9040
TS23: early distal tubule of capillary loop nephron	Present		GUDMAP:9040
TS23: early distal tubule of maturing nephron	Present		GUDMAP:9040
TS23: early proximal tubule of capillary loop nephron	Present		GUDMAP:9040
TS23: renal connecting tubule of capillary loop nephron	Absent		GUDMAP:9040
TS23: renal connecting tubule of maturing nephron	Absent		GUDMAP:9040

GUDMAP:9051 ©

Specimen GUDMAP:9051: postnatal adult (more

)
Note: This animal was sexually mature. Labeling was visualized using BM purple.

Structure	Level	Pattern	Image	Note
TS28: urinary system	Present	Regionally restricted	GUDMAP:9051
TS28: metanephros	Present	Regionally restricted	GUDMAP:9051
TS28: renal cortex	Present	Regionally restricted	GUDMAP:9051
TS28: cortical renal tubule	Present	Regionally restricted	GUDMAP:9051
TS28: renal proximal tubule	Present	Regionally restricted	GUDMAP:9051
TS28: renal proximal convoluted tubule	Present	Regionally restricted	GUDMAP:9051
TS28: segment 2 of proximal tubule	Present		GUDMAP:9051
TS28: mature renal corpuscle	Absent		GUDMAP:9051
TS28: glomerular tuft	Absent		GUDMAP:9051
TS28: glomerular capillary system	Absent		GUDMAP:9051
TS28: glomerular mesangium of glomerular tuft	Absent		GUDMAP:9051
TS28: glomerular basement membrane of mature renal corpuscle	Absent		GUDMAP:9051
TS28: visceral epithelium of mature renal corpuscle	Absent		GUDMAP:9051
TS28: Bowman's capsule of mature renal corpuscle	Absent		GUDMAP:9051
TS28: parietal epithelium of mature renal corpuscle	Absent		GUDMAP:9051
TS28: urinary space of mature renal corpuscle	Absent		GUDMAP:9051
TS28: afferent arteriole of mature renal corpuscle	Absent		GUDMAP:9051
TS28: part of afferent arteriole forming the juxtaglomerular complex	Absent		GUDMAP:9051
TS28: rest of afferent arteriole	Absent		GUDMAP:9051
TS28: efferent arteriole of mature renal corpuscle	Absent		GUDMAP:9051
TS28: extraglomerular mesangium	Absent		GUDMAP:9051
TS28: proximal straight tubule, cortical portion	Absent		GUDMAP:9051
TS28: renal distal tubule	Absent		GUDMAP:9051
TS28: distal straight tubule of renal cortex	Absent		GUDMAP:9051
TS28: macula densa	Absent		GUDMAP:9051
TS28: postmacula segment of distal straight tubule	Absent		GUDMAP:9051
TS28: premacula segment of distal straight tubule of renal cortex	Absent		GUDMAP:9051
TS28: distal convoluted tubule	Absent		GUDMAP:9051
TS28: renal connecting tubule	Absent		GUDMAP:9051
TS28: cortical collecting duct	Absent		GUDMAP:9051
TS28: renal cortical interstitium	Absent		GUDMAP:9051
TS28: renal cortical fibroblasts	Absent		GUDMAP:9051
TS28: peritubular fibroblasts of cortex	Absent		GUDMAP:9051
TS28: periarterial fibroblasts of cortex	Absent		GUDMAP:9051
TS28: resident macrophage of the cortex	Absent		GUDMAP:9051
TS28: rest of renal cortical interstitium	Absent		GUDMAP:9051
TS28: renal cortical lymphatics	Absent		GUDMAP:9051
TS28: renal cortical nerves	Absent		GUDMAP:9051
TS28: renal cortical vasculature	Absent		GUDMAP:9051
TS28: renal cortical arterial system	Absent		GUDMAP:9051
TS28: interlobular artery	Absent		GUDMAP:9051
TS28: arcuate artery	Absent		GUDMAP:9051
TS28: renal cortical venous system	Absent		GUDMAP:9051
TS28: interlobular vein	Absent		GUDMAP:9051
TS28: arcuate vein	Absent		GUDMAP:9051
TS28: renal cortical capillary	Absent		GUDMAP:9051
TS28: renal medulla	Absent		GUDMAP:9051
TS28: outer renal medulla	Absent		GUDMAP:9051
TS28: outer stripe of outer medulla	Absent		GUDMAP:9051
TS28: loop of Henle of outer stripe of outer medulla	Absent		GUDMAP:9051
TS28: proximal straight tubule of outer stripe of outer medulla	Absent		GUDMAP:9051
TS28: distal straight tubule of outer stripe of outer medulla	Absent		GUDMAP:9051
TS28: inner stripe of outer medulla	Absent		GUDMAP:9051
TS28: loop of Henle of inner stripe of outer medulla	Absent		GUDMAP:9051
TS28: thin descending limb of inner stripe of outer medulla	Absent		GUDMAP:9051
TS28: premacula segment of distal straight tubule of inner stripe of inner medulla	Absent		GUDMAP:9051
TS28: outer medullary collecting duct	Absent		GUDMAP:9051
TS28: outer medullary interstitium	Absent		GUDMAP:9051
TS28: outer medullary fibroblast	Absent		GUDMAP:9051
TS28: peritubular fibroblasts of outer medulla	Absent		GUDMAP:9051
TS28: periarterial fibroblasts of outer medulla	Absent		GUDMAP:9051
TS28: resident macrophage of the outer medulla	Absent		GUDMAP:9051
TS28: rest of outer medullary interstitium	Absent		GUDMAP:9051
TS28: inner renal medulla	Absent		GUDMAP:9051
TS28: loop of Henle, inner medullary portion	Absent		GUDMAP:9051
TS28: thin descending limb of inner medulla	Absent		GUDMAP:9051
TS28: bend of loop of Henle inner medullary portion	Absent		GUDMAP:9051
TS28: thin ascending limb of inner medulla	Absent		GUDMAP:9051
TS28: inner medullary collecting duct	Absent		GUDMAP:9051
TS28: inner medullary interstitium	Absent		GUDMAP:9051
TS28: inner medullary fibroblast	Absent		GUDMAP:9051
TS28: peritubular fibroblasts of inner medulla	Absent		GUDMAP:9051
TS28: periarterial fibroblasts of inner medulla	Absent		GUDMAP:9051
TS28: resident macrophage of the inner medulla	Absent		GUDMAP:9051
TS28: renal medullary lymphatics	Absent		GUDMAP:9051
TS28: renal medullary nerves	Absent		GUDMAP:9051
TS28: renal medullary vasculature	Absent		GUDMAP:9051
TS28: renal medullary arterial system	Absent		GUDMAP:9051
TS28: renal medullary venous system	Absent		GUDMAP:9051
TS28: renal medullary capillary	Absent		GUDMAP:9051
TS28: renal pelvis	Absent		GUDMAP:9051
TS28: pelvic urothelial lining	Absent		GUDMAP:9051
TS28: pelvic smooth muscle	Absent		GUDMAP:9051
TS28: perihilar interstitium	Absent		GUDMAP:9051
TS28: perihilar fibroblast	Absent		GUDMAP:9051
TS28: resident macrophage of the perihilar interstitium	Absent		GUDMAP:9051
TS28: rest of perihilar interstitium	Absent		GUDMAP:9051
TS28: segment 1 of proximal tubule	Ambiguous		GUDMAP:9051	expression absent from at least the first portion of segment 1
TS28: rest of inner medullary interstitium	Absent		GUDMAP:9051

GUDMAP:9052 ©

Specimen GUDMAP:9052: postnatal adult (more

)
Note: This animal was sexually mature. Labeling was visualized using BM purple.

Structure	Level	Image
TS28: urothelium of ureter	Absent	GUDMAP:9052
TS28: lamina propria of ureter	Absent	GUDMAP:9052
TS28: ureteral smooth muscle layer	Absent	GUDMAP:9052
TS28: adventitia of ureter	Absent	GUDMAP:9052

GUDMAP:9467 ©

Specimen GUDMAP:9467: embryonic day 10.5 (more

)
Note: Labeling was visualized using NBT/BCIP.

Structure	Level	Image	Note
TS17: genitourinary system	Present	GUDMAP:9467
TS17: mesonephros	Present	GUDMAP:9467
TS17: mesonephros mesenchyme	Present	GUDMAP:9467	weak expression
TS17: mesonephric tubule	Present	GUDMAP:9467	strong expression in the cranial tubules
TS17: cranial mesonephric tubule	Present	GUDMAP:9467
TS17: nephric duct, mesonephric portion	Present	GUDMAP:9467
TS17: metanephric mesenchyme	Present	GUDMAP:9467	weak expression
TS17: nephric duct	Present	GUDMAP:9467
TS17: nephric duct, metanephric portion	Absent	GUDMAP:9467
TS17: genitourinary system mesenchyme	Ambiguous	GUDMAP:9467	possible expression
TS17: caudal mesonephric tubule	Ambiguous	GUDMAP:9467

GUDMAP:9468 ©

Specimen GUDMAP:9468: embryonic day 13.5 (more

)
Note: Labeling was visualized using NBT/BCIP.

Structure	Level	Pattern	Image	Note
TS21: male reproductive system	Present	Regionally restricted	GUDMAP:9468
TS21: mesonephros of male	Present	Regionally restricted	GUDMAP:9468
TS21: mesonephric tubule of male	Present		GUDMAP:9468
TS21: cranial mesonephric tubule of male	Present		GUDMAP:9468
TS21: caudal mesonephric tubule of male	Present		GUDMAP:9468
TS21: testis	Present	Regionally restricted	GUDMAP:9468
TS21: primary sex cord	Present		GUDMAP:9468
TS21: coelomic epithelium of testis	Absent		GUDMAP:9468
TS21: interstitium of the testis	Absent		GUDMAP:9468
TS21: developing vasculature of testis	Absent		GUDMAP:9468
TS21: nephric duct of male, mesonephric portion	Absent		GUDMAP:9468
TS21: paramesonephric duct of male, mesonephric portion	Absent		GUDMAP:9468
TS21: coelomic epithelium of male mesonephros	Absent		GUDMAP:9468
TS21: nephric duct of male, rest of	Absent		GUDMAP:9468
TS21: epithelium of nephric duct of male	Absent		GUDMAP:9468
TS21: mesenchyme of nephric duct of male	Absent		GUDMAP:9468
TS21: paramesonephric duct of male, rest of	Absent		GUDMAP:9468
TS21: epithelium of rest of paramesonephric duct of male	Absent		GUDMAP:9468
TS21: mesenchyme of rest of paramesonephric duct of male	Absent		GUDMAP:9468
TS21: mesonephric mesenchyme of male	Ambiguous		GUDMAP:9468	signal seen may be background staining

GUDMAP:9469 ©

Specimen GUDMAP:9469: embryonic day 13.5 (more

)
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the male is shown. Annotators reported the male expression pattern in the metanephros is identical to female.

Structure	Level	Pattern	Image	Note
TS21: metanephros	Ambiguous		GUDMAP:9469
TS21: ureter	Ambiguous		GUDMAP:9469

GUDMAP:9470 ©

Specimen GUDMAP:9470: embryonic day 13.5 (more

)
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the male is shown. Annotators reported the male expression pattern in the bladder is identical to female.

Structure	Level	Pattern	Image	Note
TS21: primitive bladder	Ambiguous		GUDMAP:9470	possible expression

GUDMAP:9471 ©

Specimen GUDMAP:9471: embryonic day 13.5 (more

)
Note: Labeling was visualized using NBT/BCIP.

Structure	Level	Pattern	Image	Note
TS21: female reproductive system	Present	Regionally restricted	GUDMAP:9471
TS21: mesonephros of female	Present	Regionally restricted	GUDMAP:9471
TS21: mesonephric tubule of female	Present		GUDMAP:9471
TS21: nephric duct of female, mesonephric portion	Absent		GUDMAP:9471
TS21: paramesonephric duct of female, mesonephric portion	Absent		GUDMAP:9471
TS21: coelomic epithelium of female mesonephros	Absent		GUDMAP:9471
TS21: nephric duct of female, rest of	Absent		GUDMAP:9471
TS21: epithelium of nephric duct of female	Absent		GUDMAP:9471
TS21: mesenchyme of nephric duct of female	Absent		GUDMAP:9471
TS21: paramesonephric duct of female, rest of	Absent		GUDMAP:9471
TS21: epithelium of rest of paramesonephric duct of female	Absent		GUDMAP:9471
TS21: mesenchyme of rest of paramesonephric duct of female	Absent		GUDMAP:9471
TS21: mesonephric mesenchyme of female	Ambiguous		GUDMAP:9471	signal seen is likely to be background staining
TS21: ovary	Ambiguous		GUDMAP:9471	signal seen is likely to be background staining

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 03/25/2025 MGI 6.24