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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5540798
Gene symbol: Mmrn1
Gene name: multimerin 1
Probe: RIKEN clone 9830168D06 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:8922: embryonic day 10.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS17: genitourinary system Present Regionally restricted GUDMAP:8922 expression in developing vasculature; pattern is suggestive of expression in a subset of the vasculature system
TS17: genitourinary system mesenchyme Present Regionally restricted GUDMAP:8922 expression in developing vasculature
TS17: mesonephros Present Regionally restricted GUDMAP:8922 expression in developing vasculature
TS17: metanephric mesenchyme Present Regionally restricted GUDMAP:8922 expression in developing vasculature
TS17: mesonephric tubule Absent GUDMAP:8922
TS17: nephric duct, mesonephric portion Absent GUDMAP:8922
TS17: nephric duct, metanephric portion Absent GUDMAP:8922
TS17: nephric duct Absent GUDMAP:8922
TS17: developing vasculature of genitourinary system Present GUDMAP:8922
Specimen GUDMAP:8923: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: male reproductive system Present Regionally restricted GUDMAP:8923
TS21: mesonephros of male Present Regionally restricted GUDMAP:8923
TS21: testis Present Regionally restricted GUDMAP:8923
TS21: primary sex cord Present GUDMAP:8923
TS21: developing vasculature of testis Present GUDMAP:8923 published data from the literature shows Mmrn1 in vascular endothelial cells; the expression pattern seen here is similar to a vasculature pattern; pattern is suggestive of expression in a subset of the vasculature system
TS21: mesonephric tubule of male Ambiguous GUDMAP:8923
TS21: developing vasculature of male mesonephros Present GUDMAP:8923 published data from the literature shows Mmrn1 in vascular endothelial cells. The expression pattern seen here is similar to a vasculature pattern and pattern is suggestive of expression in a subset of the vasculature system
Specimen GUDMAP:8924: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the male is shown. Annotators reported the male expression pattern in the upper urinary tract and the tissues surrounding it is identical to female.
Structure Level Pattern Image Note
TS21: urinary system Present Regionally restricted GUDMAP:8924
TS21: metanephros Present Regionally restricted GUDMAP:8924
TS21: developing vasculature of metanephros Present GUDMAP:8924 published data from the literature shows Mmrn1 in vascular endothelial cells; the expression pattern seen here is similar to a vasculature pattern; pattern is suggestive of expression in a subset of the vasculature system
TS21: renal vasculature Present GUDMAP:8924
Specimen GUDMAP:8925: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: female reproductive system Present Regionally restricted GUDMAP:8925
TS21: mesonephros of female Present Regionally restricted GUDMAP:8925
TS21: ovary Present Regionally restricted GUDMAP:8925
TS21: developing vasculature of ovary Present GUDMAP:8925 published data from the literature shows Mmrn1 in vascular endothelial cells; the expression pattern seen here is similar to a vasculature pattern; pattern is suggestive of expression in a subset of the vasculature system
TS21: developing vasculature of female mesonephros Present GUDMAP:8925 published data from the literature shows Mmrn1 in vascular endothelial cells. The expression pattern seen here is similar to a vasculature pattern and pattern is suggestive of expression in a subset of the vasculature system
Specimen GUDMAP:8926: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: urinary system Present Regionally restricted GUDMAP:8926
TS21: urogenital sinus Present GUDMAP:8926
TS21: primitive bladder Present Regionally restricted GUDMAP:8926
TS21: developing vasculature of primitive bladder Present GUDMAP:8926 published data from the literature shows Mmrn1 in vascular endothelial cells and pattern is suggestive of expression in a subset of the vasculature system.
Specimen GUDMAP:9754: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: urinary system Present GUDMAP:9754
TS23: metanephros Present Regionally restricted GUDMAP:9754
TS23: renal cortex Present Regionally restricted GUDMAP:9754
TS23: renal cortical vasculature Present Regionally restricted GUDMAP:9754 regional expression in a subset of cortical blood vessels often associated with a maturing renal corpuscle which appear to be venous
TS23: renal cortical interstitium Present Regionally restricted GUDMAP:9754
TS23: renal medulla Present Regionally restricted GUDMAP:9754
TS23: renal medullary interstitium Present GUDMAP:9754
TS23: renal medullary vasculature Present Regionally restricted GUDMAP:9754 regional expression in a subset of larger medullary blood vessels especially surrounding the ureter/pelvic region of the metanephros which appear to be venous
TS23: renal pelvis Present Regionally restricted GUDMAP:9754
TS23: pelvic smooth muscle Present GUDMAP:9754
TS23: perihilar interstitium Present GUDMAP:9754
TS23: ureter Present Regionally restricted GUDMAP:9754
TS23: ureteral mesenchyme Present GUDMAP:9754
TS23: ureteral smooth muscle layer Present GUDMAP:9754
TS23: ureteral mesenchyme outer layer Present GUDMAP:9754
TS23: renal interstitium Present GUDMAP:9754
TS23: renal vasculature Present GUDMAP:9754
TS23: renal cortical venous system Present Regionally restricted GUDMAP:9754
TS23: renal medullary venous system Present Regionally restricted GUDMAP:9754
TS23: ureteric tip Absent GUDMAP:9754
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:9754
TS23: renal vesicle Absent GUDMAP:9754
TS23: comma-shaped body Absent GUDMAP:9754
TS23: s-shaped body Absent GUDMAP:9754
TS23: capillary loop renal corpuscle Absent GUDMAP:9754
TS23: maturing renal corpuscle Absent GUDMAP:9754
TS23: cortical renal tubule Absent GUDMAP:9754
TS23: cortical collecting duct Absent GUDMAP:9754
TS23: renal cortical capillary Absent GUDMAP:9754
TS23: immature loop of Henle Absent GUDMAP:9754
TS23: renal medullary capillary Absent GUDMAP:9754
TS23: medullary collecting duct Absent GUDMAP:9754
TS23: pelvic urothelial lining Absent GUDMAP:9754
TS23: urothelium of ureter Absent GUDMAP:9754
TS23: developing capillary loop stage nephron group Absent GUDMAP:9754
TS23: maturing nephron Absent GUDMAP:9754
TS23: collecting duct Absent GUDMAP:9754
TS23: early nephron Absent GUDMAP:9754
TS23: late tubule Absent GUDMAP:9754
TS23: renal cortical arterial system Absent GUDMAP:9754
TS23: renal medullary arterial system Absent GUDMAP:9754
TS23: nephrogenic zone Ambiguous GUDMAP:9754
TS23: nephrogenic interstitium Ambiguous GUDMAP:9754 possible regional expression
TS23: cap mesenchyme Ambiguous GUDMAP:9754 possible regional expression
Specimen GUDMAP:9755: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: ureter Present Regionally restricted GUDMAP:9755
TS23: ureteral mesenchyme Present GUDMAP:9755
TS23: ureteral smooth muscle layer Present GUDMAP:9755
TS23: ureteral mesenchyme outer layer Present GUDMAP:9755
TS23: urothelium of ureter Absent GUDMAP:9755
Specimen GUDMAP:9756: postnatal adult (more )
Note: This animal was sexually mature. Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS28: urinary system Present GUDMAP:9756
TS28: metanephros Present Regionally restricted GUDMAP:9756
TS28: renal cortex Present Regionally restricted GUDMAP:9756
TS28: cortical renal tubule Present Regionally restricted GUDMAP:9756
TS28: renal proximal tubule Present Regionally restricted GUDMAP:9756
TS28: renal proximal convoluted tubule Present Regionally restricted GUDMAP:9756
TS28: segment 2 of proximal tubule Present GUDMAP:9756 very weak expression
TS28: proximal straight tubule, cortical portion Present GUDMAP:9756 moderate expression
TS28: renal medulla Present Regionally restricted GUDMAP:9756
TS28: outer renal medulla Present Regionally restricted GUDMAP:9756
TS28: outer stripe of outer medulla Present Regionally restricted GUDMAP:9756
TS28: proximal straight tubule of outer stripe of outer medulla Present GUDMAP:9756
TS28: mature renal corpuscle Absent GUDMAP:9756
TS28: renal distal tubule Absent GUDMAP:9756
TS28: renal connecting tubule Absent GUDMAP:9756
TS28: cortical collecting duct Absent GUDMAP:9756
TS28: renal cortical interstitium Absent GUDMAP:9756
TS28: renal cortical vasculature Absent GUDMAP:9756
TS28: distal straight tubule of outer stripe of outer medulla Absent GUDMAP:9756
TS28: inner stripe of outer medulla Absent GUDMAP:9756
TS28: outer medullary collecting duct Absent GUDMAP:9756
TS28: outer medullary interstitium Absent GUDMAP:9756
TS28: inner renal medulla Absent GUDMAP:9756
TS28: renal pelvis Absent GUDMAP:9756
TS28: ureter Absent GUDMAP:9756
TS28: segment 1 of proximal tubule Ambiguous GUDMAP:9756
Specimen GUDMAP:9757: postnatal adult (more )
Note: This animal was sexually mature. Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS28: ureter Absent GUDMAP:9757
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/16/2024
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